Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1240 ATGAAAAGTAGAGTCAAACAGATTTCTCTTCTTAAGAACATGGCTGCTGCTGGGGAAATTGGGGCTGCTGAATTCCTTAAGGGTACATGTAGACAAAGTCTCTTCCTTGTGAAGAAATCTCATTGGCAGAGGAGTAATTTGCTTTGGGGTACAGTTTTGAGTAGAAATCAAGTACGGGGTTCTACTAGAAGAGCCTTGTCTTTGAGGTGCCATGCTCAAACAAATCCCCAAGCTGTGGTTGTTGGGGGTGTCAGTAGCTCTGTAGATGATCAGTCTAGCTTGGTTGAGAAGCCTGCCTTGGAAGTTATTCATTTTCACCGGGTTCCATTGATTCAAGAGAGTGCAGCTAGTGAACTTCTCAAGGAGATTAAAATAAAAATCTCTGATCAGATAGTGGCTTTGCAAACAGAACAATGTTTCAATATTGGGATTGAAGCGAAACTTTCAAGTCAAAAACTTTCAGTACTTAAATGGCTTCTTCAAGAAACATATGAACCTGAAGCATTGCAAACTGAGAGCTTTCTTGAGAAAAGAAGGAAGGAAGGTTTGAGTACGGTTATAATAGAGGTTGGCCCTAGGTTGTCATTTACCACAGCTTGGTCAACTAACGCTGTTGCAATTTGCCGTGCAAGTGGATTGACAGAGGTGACACGTTTGGAGCGTTCAAGGAGGTACTTGTTATATACTCAGGGTGATTTGGAAGATTTTCAAATCAATGAATTTGCAGCAATGGTGCATGATAGAATGACCGAATGTATTTACATCCAGAAGCTAACATCTTTTGAGACGAGTGTCATTCCAGAGGAAGTCTATCATATACCCATCATGGAGGAGGGGCAAAAGGCATTAGAAGAAATTAATCAGCAAATGGGTTTAGCTTTTGACGACCAAGATATAGAATACTACACTAAACTTTTCAGAGAGGATATTAAGCGTGATCCAACTAATGTTGAATTGTTTGATATTGCACAATCCAACAGTGAGCATAGCAGGCATTGGTTTTTTGCAGGAAAGATTATCATTGACGGGCAACTCATGGATGAGTCATTAATGCAGATTGTGAAAAGAACTTTACAAGCAAATCCAAATAACTCAGTTATTGGATTTAAGGATAACTCCAGTGCAATTAGGGGTTTCCCAGTGAAGCAGTTGCGACCAGTTTGGCCTGGGTCAGCGTGTCCGTTAAACTTGACAGCACATGATCTAGATATCTTATTTACAGCTGAAACTCATAATTTTCCATGTTCAGTTGCTCCTTATCCTGGTGCAGAGACAGGTGCAGGAGGTCGCATTAGGGATACTCATGCCACAGGAAGGGGTTCTTTTGTCCAGGCAGCTACGGCAGGTTATTGTGTTGGGAATCTCAACATGCCTGGGTCTTATGCTCAATGGGAAGACTCATCATTTACTTATCCTTCAAATCTAGCATCACCTTTGCAGATCCTCCTTGATTCTAGTAATGGTGCATCTGATTATGGCAACAAATTTGGAGAGCCTTTGATTCAAGGCTTTTGCAGGACTTTTGGAATGAGACTTCCTAGTGGGGAAAGGAGGGAATGGTTGAAACCAATAATGTTTAGTGCCGGCATTGGACAGATTGACCATATTCATATATCAAAGGGAGAGCCCGACATTGGAATGTTAGTTGTTAAGATTGGAGGCCCTGCTTATCGTATTGGTATGGGAGGTGGGGCAGCCTCGAGCATGGTCAGTGGCCAGAATGATGCAGAGCTTGATTTCAATGCTGTACAACGTGGGGATGCTGAGATGGCTCAAAAATTGTATCGTGTGGTTCGTGCTTGCATAGAAATGGGAGAGAAAAATCCAATCATCAGCATTCATGATCAGGGGGCTGGTGGGAATTGTAATGTTGTGAAGGAAATTATATACCCAAAGGGTGCTGAGATAGATATCAGAGCAGTTGTGGTTGGTGATCACACAATGTCTGTTCTTGAAATTTGGGGTGCAGAATATCAAGAGCAAGATGCAATCTTGGTGAGGCCTGAAAGTCGTAATCTTTTACAATCAATCTGTGATAGGGAAAAGGTATCAATGGCTGTGATTGGTGCTATTAATGGTAGTGGACGTGTTGTTTTAGTTGACACCTTGGCAACTCAGAAGTGTCTATCAAATGGACTTCCTCCTCCTCCCCCTGCTGTGGATCTTGAATTGGAGAAGGTACTTGGGGACATGCCTAAAAAATCTTTTAATTTTTCCCGAGTTGTGTACGAGCAAAATCCATTTGATCTAGCTCCAACAGTCACAGTAATGGATTCTTTGAAGAGGGTATTACATTTGCCATCTGTTTGCTCAAAACGCTTCTTGACAACAAAGGTTGATAGGTGTGTTACTGGTCTCGTTGCACAGCAACAAACAGTTGGTCCTTTGCAAATTCCTCTTGCTGATGTTGCCGTTATTGCTCAGACTTTTACTGACTTGACTGGAGGTGCATGTGCCATTGGAGAGCAACCAATCAAAGGTTTGCTAGACCCCAAAGCAATGGCAAGGTTAGCTGTTGGAGAAGCACTCACAAATCTTGTATGGGCAAAGGTCACTTCCTTATCTGATGTTAAGGCAAGCGGTAATTGGATGTATGCTGCGAAGCTTGATGGGGAAGGAGCTTCCATGTATGATGCTGCCCTATCTTTGTCAGAAGCAATGATTGAACTTGGTATTGCTATAGATGGTGGGAAAGACAGCCTTTCTATGGCAGCTCATGCTGGAGGTGAAGTTGTTAAGGCTCCAGGAAACCTTGTAATTAGTGTTTATGTCACTTGTCCTGATATTACAAAAACAGTGACACCTGATTTGAAACTTGAAGATAATGGTATTTTGCTTCATATTGATATGGCAAAAGGAAAGCGACGGTTAGGTGGATCTGCTCTTGCCCAGGTATTTGATCAAGTTGGGGATCAATGTCCTGATCTTGATGATGTTCCTTACTTTAAAAGGGTCTTTGAGACTGTCCAAGACCTTCTTACAGATGGATTAATCTCTGCTGGACATGACATAAGTGATGGTGGGCTGCTAGTTTGTGCTTTAGAGATGGCATTTTCTGGAAATTGTGGGTTTACTTTGGACTTGACATCAAAAGGAAATAGTCTTTTTGAAACCCTCTATGCAGAAGAACTTGGGTTAATTGTTGAGGTGAGCAAGAAAAAGTTGAATACTGTGCTAGATAAGTTGAACAATGCTGGTGTTACCAGTGAGATTGTAGGACAAGTAACTGCTACTTCATTGGTAGAAGTTAAGGTTGATGGGGGGACTTGTTTGAAAGAAAGTACTTCTACCCTCAGGGATATGTGGGAAGAAACCAGTTTTCAGCTGGAAAAGTTCCAAAGGTTGGCATCTTGTGTTGATATGGAAAGAGAAGGATTAAAACATAGATATGCACCTTCATGGGAACTGTCTTTTTCTCCTTCCTTCACTGACAAAAAGTACATGCTTGCAACTTCTAAACCAAAAGTTGCTGTGATCAGAGAAGAAGGCAGCAATGGAGATAGAGAAATGGCCGCAGCATTTTATGCAGCTGGTTTTGAACCATGGGATGTTACAATGTCAGACCTTCTTAATGGAGTGATCTCTTTGCAAGAGTTCCGTGGGATTGTTTTTGTCGGTGGATTTAGTTATGCAGACGTGCTTGATTCTGCCAAAGGATGGTCTGCTTGTATAAGATTTAATGAGCCTATTATAAAGCAGTTTCAAGAGTTTTACAACCGTTCAGATACTTTCAGCCTTGGAGTTTGTAATGGTTGTCAACTAATGGCTTTGTTGGGATGGGTACCAGGCCCACAGGTTGGAGGTGTTCTTGGTGTTGGTGGGGACCTTTCCCAGCCAAGATTCATTCACAATGAGTCTGGGCGATTTGAGTGCCGCTTTACAAGTGTGACAATAAAGGACTCTCCAGCAATAATGTTTAAAGGTATGGAGGGTAGTACTCTTGGGGTATGGGCTGCACATGGTGAGGGAAAAGCATATTTCCCAGATGAAGATGTGCTTGATCGTATTGTTCATTCCGAGTTAGCTCCTATAAGATATTGTGATGATGGTGGCAATCCGACAGAGCAATATCCTTTCAATGTAAATGGCTCTCCTTTAGGGGTCGCAGCTATTTGTTCTCCAGATGGAAGACATCTTGCCATGATGCCTCATCCAGAGCGTTGCTTCTTAATGTGGCAGTTCCCATGGTATCCAAAGAAGTGGGATGTGGACAAAAAGGGGCCTAGTCCATGGCTGCGCATGTTCCAAAATGCTAGAGAGTGGTGTTCTTTAAATGATTGCTTAGCTGCCGAAAAGTGA 4299 0.4229 MKSRVKQISLLKNMAAAGEIGAAEFLKGTCRQSLFLVKKSHWQRSNLLWGTVLSRNQVRGSTRRALSLRCHAQTNPQAVVVGGVSSSVDDQSSLVEKPALEVIHFHRVPLIQESAASELLKEIKIKISDQIVALQTEQCFNIGIEAKLSSQKLSVLKWLLQETYEPEALQTESFLEKRRKEGLSTVIIEVGPRLSFTTAWSTNAVAICRASGLTEVTRLERSRRYLLYTQGDLEDFQINEFAAMVHDRMTECIYIQKLTSFETSVIPEEVYHIPIMEEGQKALEEINQQMGLAFDDQDIEYYTKLFREDIKRDPTNVELFDIAQSNSEHSRHWFFAGKIIIDGQLMDESLMQIVKRTLQANPNNSVIGFKDNSSAIRGFPVKQLRPVWPGSACPLNLTAHDLDILFTAETHNFPCSVAPYPGAETGAGGRIRDTHATGRGSFVQAATAGYCVGNLNMPGSYAQWEDSSFTYPSNLASPLQILLDSSNGASDYGNKFGEPLIQGFCRTFGMRLPSGERREWLKPIMFSAGIGQIDHIHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRVVRACIEMGEKNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAVVVGDHTMSVLEIWGAEYQEQDAILVRPESRNLLQSICDREKVSMAVIGAINGSGRVVLVDTLATQKCLSNGLPPPPPAVDLELEKVLGDMPKKSFNFSRVVYEQNPFDLAPTVTVMDSLKRVLHLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPLADVAVIAQTFTDLTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKVTSLSDVKASGNWMYAAKLDGEGASMYDAALSLSEAMIELGIAIDGGKDSLSMAAHAGGEVVKAPGNLVISVYVTCPDITKTVTPDLKLEDNGILLHIDMAKGKRRLGGSALAQVFDQVGDQCPDLDDVPYFKRVFETVQDLLTDGLISAGHDISDGGLLVCALEMAFSGNCGFTLDLTSKGNSLFETLYAEELGLIVEVSKKKLNTVLDKLNNAGVTSEIVGQVTATSLVEVKVDGGTCLKESTSTLRDMWEETSFQLEKFQRLASCVDMEREGLKHRYAPSWELSFSPSFTDKKYMLATSKPKVAVIREEGSNGDREMAAAFYAAGFEPWDVTMSDLLNGVISLQEFRGIVFVGGFSYADVLDSAKGWSACIRFNEPIIKQFQEFYNRSDTFSLGVCNGCQLMALLGWVPGPQVGGVLGVGGDLSQPRFIHNESGRFECRFTSVTIKDSPAIMFKGMEGSTLGVWAAHGEGKAYFPDEDVLDRIVHSELAPIRYCDDGGNPTEQYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQFPWYPKKWDVDKKGPSPWLRMFQNAREWCSLNDCLAAEK 1432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1240 1432 SUPERFAMILY PurM C-terminal domain-like 942 1135 IPR036676 -
Lele28g1240 1432 FunFam Phosphoribosylformylglycinamidine synthase, putative 742 926 - -
Lele28g1240 1432 Pfam Formylglycinamide ribonucleotide amidotransferase N-terminal 139 255 IPR040707 -
Lele28g1240 1432 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1155 1399 - -
Lele28g1240 1432 CDD PurL_repeat1 318 701 - -
Lele28g1240 1432 CDD GATase1_FGAR_AT 1156 1419 - -
Lele28g1240 1432 FunFam Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial 932 1098 - -
Lele28g1240 1432 SUPERFAMILY Class I glutamine amidotransferase-like 1151 1422 IPR029062 -
Lele28g1240 1432 SUPERFAMILY PurM N-terminal domain-like 752 934 IPR036921 -
Lele28g1240 1432 SMART GATase_5_2 1153 1422 - -
Lele28g1240 1432 SUPERFAMILY PurM N-terminal domain-like 334 541 IPR036921 -
Lele28g1240 1432 Gene3D - 533 707 IPR036676 -
Lele28g1240 1432 Gene3D - 928 1097 IPR036676 -
Lele28g1240 1432 SUPERFAMILY PurM C-terminal domain-like 543 777 IPR036676 -
Lele28g1240 1432 Hamap Phosphoribosylformylglycinamidine synthase [purL]. 102 1423 IPR010073 GO:0004642|GO:0006189
Lele28g1240 1432 TIGRFAM FGAM_synt: phosphoribosylformylglycinamidine synthase 106 1421 IPR010073 GO:0004642|GO:0006189
Lele28g1240 1432 Gene3D - 327 532 IPR036921 -
Lele28g1240 1432 Gene3D - 741 926 IPR036921 -
Lele28g1240 1432 FunFam Phosphoribosylformylglycinamidine synthase, putative 1098 1423 - -
Lele28g1240 1432 FunFam Putative phosphoribosylformylglycinamidine synthase 266 326 - -
Lele28g1240 1432 Gene3D - 1098 1423 IPR029062 -
Lele28g1240 1432 FunFam Probable phosphoribosylformylglycinamidine synthase 327 532 - -
Lele28g1240 1432 Pfam Formylglycinamide ribonucleotide amidotransferase linker domain 283 332 IPR041609 -
Lele28g1240 1432 FunFam Phosphoribosylformylglycinamidine synthase, putative 533 711 - -
Lele28g1240 1432 Pfam AIR synthase related protein, C-terminal domain 956 1085 IPR010918 -
Lele28g1240 1432 Pfam AIR synthase related protein, C-terminal domain 546 699 IPR010918 -
Lele28g1240 1432 Gene3D Phosphoribosylformylglycinamidine synthase, linker domain 266 326 - -
Lele28g1240 1432 SUPERFAMILY FGAM synthase PurL, linker domain 266 333 - -
Lele28g1240 1432 SUPERFAMILY PurS-like 103 261 IPR036604 -
Lele28g1240 1432 CDD PurL_repeat2 802 1075 - -
Lele28g1240 1432 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 101 1423 - -
Lele28g1240 1432 Pfam CobB/CobQ-like glutamine amidotransferase domain 1153 1422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1240 Lele-ChrLele28 8193470 8198254 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g1240 28 8193470 8198254 Lele28g1240 28 8193470 8198254 ECH
Lele25g1231 25 8195837 8202547 Lele28g1240 28 8193470 8198254 hybridization
Lele26g1247 26 8161391 8164521 Lele28g1240 28 8193470 8198254 hybridization