Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1235 ATGCAATTTTTTCGATGCTTTGTAGAGCTATGTTACACTGTTTTAGGGCTTTTTTATGGTCGCTCATATTACAGTGTAGGTAAAGATGGGATGATCTACTTGAAATTTGAGAGTGGTGGAAGACTTGAAATGGGACGTTTAAAGCTACAAGCTGGTATCAATTCGATAGAGGAGGAACCTGAGGAATATGATGATGCATATCCTAACAAAACTACTTTAGCATGCATGATCAATTCTGAAATTGGCGCTGTTATGGCAGTCATGCGAAGAAATGTTAGATGGGGAGGCCGTTATATGTCTGGTGATGATCAGCTGGAGCACTCCCTTATTCAATCTTTGAAGACCTTAAAGAGGCAAATATTTTCATGGCAACATCAGTGGCATGCCATTAGCCCAGCCTTGTATCTCCAGCCTTTTCTGGAGGTTATTCAATCAGATGAAACTGGTGCACCAAGTACCAGTGTTGCTTTGTCATCTGTTTATAAGATCTTAACTCTTGATGTGATTGATCAAAACACTGTCAACGTTGAGGATGCCATGCATCTGGTGGTTGATTCTGTCACTAGCTGCAGATTTGAGGTGACTGATCCTGCATCAGAAGAAGTGGTTTTGATGAAGATACTACAAGTTTTTGTGGCATGTATGAAAAGTAAAGCATCTGTAATGTTGAGTAACCAACATGTTTGCACCTTAGTGAATACTTGTTATAGAATAGTTCATCAAGCTGGAACAAAAAGTGAGTTATTGCAGCGGATAGCACGCCACACAATGCATGAACTTATTAGGTGTATTTTCTCGCATCTTCAAGATGTTGGCAACACAGAGCATGCATTGGTAAATGGAAGCTCTACTGTAAAACAAGAGATTGGAGGGTTAAATAATGAGTATGCTTTTGGAAGTAACCAATTACAGAATGGAAGCATGAATTCCGAATATGATAACCAGTCATTACCCACAGACTCTACTCCCACTGCTGGAACTGTGATTGATGAAAACACGGCTATTGCTAGTAATGGCAAGGGGACTGTACCTTATGACATGCATCTTATGACTGAGCCATATGGAGTTCCTTGCATGGTGGAAATATTTCATTTCCTGTGTTCTTTGCTGAATGCTGAGCATGTGGATATGGGTCCTAGATCAAATACACCAGCCTTTGATGAAGACGTGCCCCTTTTTGCCTTAAATTTAATTAATGCTGCTATAGAATTGGGAGGGCCTTCCATTCGCCGACACCCCAGATTGCTGAGCTTAGTTCAGGATGAATTGTTCCGTAGTCTGATGCAGTTTGGTTTATCAACAAGTCCCCTTATACTTTCAATGGTGTGTAGCATCGTTCTCAACTTGTATCATCATCTCCGAGTAGAACTCAAATTGCAGCTTGAAGCATTTTTTTCTTGTGTCATTTTGAGGCTTGCACAAAGCAGATATGGCGCTTCATACCAGCAGCAAGAGGTTGCCATGGAGGCTGTTGTTGACTTCTGCAGGCAAAAAACATTTATGGTAGATATGTATGCTAACTTTGACTGTGACATTACTTGCAGTAATGTCTTTGAAGACCTTGCTAATTTGTTGTCAAAAAGTGCATTTCCTGTAAACTGCCCTTTGTCTTCTATGCATATTCTTGCTTTAGATGGTCTCATTGCCGTTATACAAGGAATGGCTGAACGGATTGCCAATGGATCTAATATTTCAGAACATTCACCTGTGAATCTTGAAGAGTATACTCCATTTTGGATGGTTACGTGTGATAATTACAACGATCCAAGTCATTGGGTCCCCTTTGTCCGTCGAAGGAAGTACATGAAGAGAAGATTGATGATAGGAGCTGACCACTTTAATCGTGACCCTAAGAAAGGTCTAGAGTTTCTACAAGGAACACATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCTTGCTTTTTCAGGTACACTGCTGGGCTGGATAAGAATCTTGTTGGTGATTTCCTAGGAAACCATGATGAATTCTGTGTTCAGGTTCTTCATAAATTTGCTGGAACATTTGATTTCCAAGATATGACTATAGACACTGCTCTGCGACTCTTTCTTGAGACATTCAGACTACCAGGAGAATCGCAAAAGATACAAAGGGTGCTTGAAGCCTTTTCTGAAAGATACTATGAGCAGTCACCGCATATTCTTGCTAACAAGGATGCTGCCCTTGTATTGTCATATTCACTCATATTGCTGAATACAGATCAGCATAATGTACAGGTTAAAAAGAAGATGACAGAAGATGATTTTATACGTAATAATAGGCATATAAATGGTGGCAATGATCTGCCTCGAGAGTTCCTGTCGGAGCTTTACCATTCAATTTGTAAGAATGAGATCCGCACTACCCCTGATCAAGGTGCTGGATTTCCTGAAATGACTCCAAGTCGGTGGATTGATCTGCTGCACAAATCAAAGAAAAGTGCTCCATTTATTGTATCTGATTCCAGGGCCTACCTTGATCATGATATGTTTGCTATAATGTCAGGCCCAACAATTGCTGCCATATCTGTGGTATTTGATCATGCTGAACATGAAGAGGTGTACCAAACTTGTATGGATGGATTCTTAGCTGTTGCTAAAATTTCAGCTTGCCATCATCTTGAAGATGTTCTGGATGATCTGGTTGTGTCTCTTTGTAAGTTCACTACTCTTTTGAACCCATCATCAGTAGAGGAACCAGTCCTAGCCTTTGGAGATGACACAAAAGCAAGAATGGCAACTGTAACTGTTTTCAGTATTGCTAATAGATATGGGGATTACATCCGCACAGGATGGAGAAATATACTTGATTGTATCTTAAGATTACACAAGTTAGGACTTCTTCCTGCCCGTGTAGCCAGTGATGCAGCTGATGAGTCAGAACTTTCTACTGAGACTGGGCACGGGAAGCCTATAACAAATTCTTTGTCATCAGCTCATATGCCATCCATTGGTACTCCGAGGAGATCCTCAGGATTGATGGGGAGGTTTAGTCAGCTCTTGTCTCTTGAAACTGAAGAGCCAAGGTCACAACCTACTGAACAACAACTTGCTGCTCATCAGCGGACCCTACAAACAATACAGAAATGTCACATTGACAGCATATTTACTGAAAGTAAATTTTTGCAAGCTGAATCTCTATTGCAACTTGCAAGAGCGCTTATTTGGGCAGCAGGGTTTCCTCAAAAAGGGAGCAGCACACCTGAGGATGAAGATACTGCTGTGTTCTGCCTAGAGTTGTTGATTGCAATTACTTTGAATAATAGGGATAGAATTGGAATACTTTGGCAGGGTGTGTATGAGCATATTTCCAATATTGTTCAGTCAACTGTAATGCCTTGTGCACTGGTAGAGAAGGCTGTTTTTGGACTTCTAAAGATTTGCCAGCGGTTGCTTCCCTACAAGGAGAGCATTGCTGATGAACTTCTGAGGTCCCTGCATCTAGTCTTGAAGCTTGATGCTCGAGTTGCTGATGCATACTGTGAGCAGATTACACAGGAAGTCAATCGCCTGGTGAAGGCAAATGCTTCTCATATCAGATCACAGTTAGGATGGCGTACAATTACATCATTACTTTCCATTACAGCAAAGCACCTAGAAGCATCTGAGGTTGGGTTTGAAGCACTATTATTCATAATGTCAGATGGAGCCCACTTGCAACCAGCTAATTATGTTCTCTGTGTAGAAGCTGCTAGGCACTTTGCTGAATCTCGAGTTGGACAGGCAGAACGATCTGTACGGGCACTGGATCTGATGGCAGGGTCTGTTGATTGCTTAGTTCAGTGGACTAGTAAGGCTAGGCAGACAATGGGGGAGGAGGAAGTGTCAAAATTATCTCACGACATTGGAGAGATGTGGTTAAGGCTAGTGCAGGGACTAAGGAAAGTATGTTTAGACCAGAGAGAGGAGGTTAGAAACCATGCTATATTATCACTGCAGAAGTGCTTGACTGGAATTGATGGGATTTATCTCTCCCATAGTGTGTGGTTACAGTGTTTTGATCTGGTCATCTTCACTGTGCTTGATGATCTGCTCGAAATTGCACAAGGACAGTCTCAAAAGGATTACCGCAACATGGAAGGCACCCTCATCTTTGCCATGAAGCTCTTGTCTAAAGTATATCTTCAGTTGGTCCAAGACCTATCACAGTTGTCAACATTTTGCAAACTATGGTTGGGGCTGCTGAGCCGAATGGAAAAATATATGAAAGTGAAAGTTAGGGGGAAAAAGAGTGAGAAGCTTCAAGAGCTAGTGCCTGAGCTTCTAAAAAATACCTTACTTGTTATGAAGACAAGGGGCATCCTGGTGCAGAGGAGTGCCTTAGGTGGTGATAGTTTATGGGAATTGACATGGCTACATGTGAATAACATTGCTCCGTCATTGCAATCTGAGGTGTATCCTGAGCAGGACTCTGGGCATTCGCAACACGAAAAGGGTGGATCAAATGAAGGTTTGGAGCTCGATGAAACGGGTTCTGTTAGTCCCAATGACACAGCCAAACGTGAAGATTCTGCCGTTGTCGGTTAA 4527 0.4186 MQFFRCFVELCYTVLGLFYGRSYYSVGKDGMIYLKFESGGRLEMGRLKLQAGINSIEEEPEEYDDAYPNKTTLACMINSEIGAVMAVMRRNVRWGGRYMSGDDQLEHSLIQSLKTLKRQIFSWQHQWHAISPALYLQPFLEVIQSDETGAPSTSVALSSVYKILTLDVIDQNTVNVEDAMHLVVDSVTSCRFEVTDPASEEVVLMKILQVFVACMKSKASVMLSNQHVCTLVNTCYRIVHQAGTKSELLQRIARHTMHELIRCIFSHLQDVGNTEHALVNGSSTVKQEIGGLNNEYAFGSNQLQNGSMNSEYDNQSLPTDSTPTAGTVIDENTAIASNGKGTVPYDMHLMTEPYGVPCMVEIFHFLCSLLNAEHVDMGPRSNTPAFDEDVPLFALNLINAAIELGGPSIRRHPRLLSLVQDELFRSLMQFGLSTSPLILSMVCSIVLNLYHHLRVELKLQLEAFFSCVILRLAQSRYGASYQQQEVAMEAVVDFCRQKTFMVDMYANFDCDITCSNVFEDLANLLSKSAFPVNCPLSSMHILALDGLIAVIQGMAERIANGSNISEHSPVNLEEYTPFWMVTCDNYNDPSHWVPFVRRRKYMKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHKFAGTFDFQDMTIDTALRLFLETFRLPGESQKIQRVLEAFSERYYEQSPHILANKDAALVLSYSLILLNTDQHNVQVKKKMTEDDFIRNNRHINGGNDLPREFLSELYHSICKNEIRTTPDQGAGFPEMTPSRWIDLLHKSKKSAPFIVSDSRAYLDHDMFAIMSGPTIAAISVVFDHAEHEEVYQTCMDGFLAVAKISACHHLEDVLDDLVVSLCKFTTLLNPSSVEEPVLAFGDDTKARMATVTVFSIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESELSTETGHGKPITNSLSSAHMPSIGTPRRSSGLMGRFSQLLSLETEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGFPQKGSSTPEDEDTAVFCLELLIAITLNNRDRIGILWQGVYEHISNIVQSTVMPCALVEKAVFGLLKICQRLLPYKESIADELLRSLHLVLKLDARVADAYCEQITQEVNRLVKANASHIRSQLGWRTITSLLSITAKHLEASEVGFEALLFIMSDGAHLQPANYVLCVEAARHFAESRVGQAERSVRALDLMAGSVDCLVQWTSKARQTMGEEEVSKLSHDIGEMWLRLVQGLRKVCLDQREEVRNHAILSLQKCLTGIDGIYLSHSVWLQCFDLVIFTVLDDLLEIAQGQSQKDYRNMEGTLIFAMKLLSKVYLQLVQDLSQLSTFCKLWLGLLSRMEKYMKVKVRGKKSEKLQELVPELLKNTLLVMKTRGILVQRSALGGDSLWELTWLHVNNIAPSLQSEVYPEQDSGHSQHEKGGSNEGLELDETGSVSPNDTAKREDSAVVG 1508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1235 1508 MobiDBLite consensus disorder prediction 958 992 - -
Lele28g1235 1508 SUPERFAMILY Sec7 domain 600 792 IPR035999 GO:0005085|GO:0032012
Lele28g1235 1508 FunFam ARF guanine-nucleotide exchange factor GNOM 596 678 - -
Lele28g1235 1508 SMART sec7_5 599 786 IPR000904 GO:0005085|GO:0032012
Lele28g1235 1508 CDD Sec7 602 786 IPR000904 GO:0005085|GO:0032012
Lele28g1235 1508 Gene3D - 596 678 - -
Lele28g1235 1508 SUPERFAMILY ARM repeat 202 1399 IPR016024 -
Lele28g1235 1508 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 357 517 IPR032691 -
Lele28g1235 1508 MobiDBLite consensus disorder prediction 1470 1484 - -
Lele28g1235 1508 Gene3D - 679 796 IPR023394 -
Lele28g1235 1508 FunFam ARF guanine-nucleotide exchange factor GNOM-like 678 796 - -
Lele28g1235 1508 ProSiteProfiles SEC7 domain profile. 595 784 IPR000904 GO:0005085|GO:0032012
Lele28g1235 1508 Pfam Sec7 domain 603 786 IPR000904 GO:0005085|GO:0032012
Lele28g1235 1508 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 108 1470 - -
Lele28g1235 1508 MobiDBLite consensus disorder prediction 1464 1508 - -
Lele28g1235 1508 MobiDBLite consensus disorder prediction 966 985 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1235 Lele-ChrLele28 8134465 8144715 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1226 25 8148092 8155410 Lele28g1235 28 8134465 8144715 hybridization
Lele26g1240 26 8121310 8127380 Lele28g1235 28 8134465 8144715 hybridization