Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1226 ATGTGGCATCTTGTGAAGCTGCCACCATATCGACATTGTTTCACATATGGGTCATGTTCTGAGGGACGTAATCCCGGGCGAGATTTCTCTGTAATGTGCCCCTCCGGCTTCAGATTTATGGGCTTAACCGAGGGATCGAGATTGTTTCGGAATCCAGTGTCTGCCAATTTCTTTGAGTATCTGATCAAGTTCGTTATAGACATTATTGGGCAATGCCAAGGGGATCATGGGAAAAAGCTTGATCTATCTTTGTATGCGGAAAACTGGACTAGTCTAATTCTGTCACCTGCAAATCTACAAGCTGGTATCAATGCGATAGAGGAGGAACCTGAGGAATATGATGATGCATATCCTAATAAAACTACTTTAGCATGCATGATCAATTCTGAAATTGGTGCTGTTATGGCAGTCATGCGAAGAAATGTTAGATGGGGAGGCCGTTATATGTCTGGCGATGATCAGCTGGAGCACTCCCTTATTCAATCTCTGAAGAATTTGAAGAGGCAAATATTTTCATGGCAACATCAGTGGCATGCTATCAACCCGGCCTTGTATCTCCAGCCTTTTCTGGATGTAATTCGATCAGATGAAACTGGTGCACCAAGTACCAGTGTTGCTTTGTCATCTGTTTATAAGATCTTAACTCTTGATGTGATTGATAAAAACACTGTCAATGTTGAGGATGCCATGCACCTGGTGGTTGATTCTGTCACTAGCTGCAGATTTGAGGTGACTGATCCTGCATCAGAAGAAGTGGTTTTAATGAAGATACTACAAGTTTTTGTTGCATGTATGAAAAGTAAAGCATCTGTAATGTTGAGTAACCAACATGTTTGCACCTTAGTGAATACTTGTTATCGAATAGTTCATCAAGCTGGAACAAAAAGTGAGTTATTGCAGCGGGTAGCACGCCACACAATGCATGAACTTATTAGGTGTATTTTCTCGCATCTTCAAGATGTTGGCAACACAGAGCATGCATTGGTAAATGGAAGCTCTACCTTAAAACAAGAGGTTGGAGGGTTAAATAATGAGTATGCTTTTGGAAGTGAACAATTAGAGAATGGGAGCATGAATTCTGAATATGATAATCAGTCATTACCCACAGACTCTGCTCCCCGTGCTGCAACTGTGATTGATGAAAACGCCACTATTGCTAGTAATGGCAAGGGGAATGTACCTTATGACATGCATCTTATGACTGAGCCATATGGAGTTCCCTGCATGGTGGAAATATTTCATTTCCTGTGTTCTTTGCTGAATGCTGAGCATGTGGATATGGGTCCTAGATCAAATACAATAGCCTTTGATGAAGATGTGCCCCTTTTTGCCTTAAATTTAATTAATGCTGCTATAGAAATGGGAGGGCCTTCCATTCGCCGACACCCCAGATTGCTGAGCTTAGTTCATGATGAATTGTTCCGTAGTCTGATGCAGTTTGGTTTATCAACAAGTCCTCTTATACTTTCAATGGTGTGTAGCATCGTTCTCAACTTGTATCATCTTCTTCGAGCTGAACTCAAATTGCAGCTTGAAGCATTTTTTTCTTGTGTCATTTTGAGGCTTGCACAAAGCAGATATGGCGCTTCATACCAGCAGCAAGAGGTTGCCATGGAGGCTGTTGTTGACTTCTGCGGGCAAAAAACATTTATGGTAGATATGTATGCTAACTTTGACTGTGACATTACTTGCAGTAATGTATTTGAAGACCTTGCTAATTTGTTGTCAAAAAGTGCATTTCCTGTAAACTGCCCTTTGTCTTCTATGCATACTCTTGCTTTAGATGGTCTCATTGCTGTTATACAAGGAATGGCTGAACGGATTGCCAATGGATCTAATATTTCAGAACATTCACCTGTGATTCTTGAAGAGTATACTCCATTTTGGATGGTTAAGTGTGAAAATTACAATGATCCAAATCATTGGGTCCCTTTTGTCCGTCGAAGGAAGTACATGAAGAGAAGATTGATGATTGGAGCTGACCACTTTAATCGTGACCCTAAGAAAGGTCTAGAGTTTCTACAAGGAACACATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCTTGCTTTTTCAGGTACACTGCCGGGCTGGATAAGAATCTTGTTGGTGATTTCCTAGGAAATCATGATGAATTTTGTGTTCAGGTTCTTCATAAATTTGCTGGAACATTTGATTTCCAAGATATGAATATAGACACTGCTCTGCGACTCTTTCTTGAGACATTCAGACTACCAGGAGAATCACAAAAGATACAAAGGGTGCTTGAAGCCTTTTCTGAAAGATACTATGAGCAGTCACCACATATTCTTGCTAACAAGGATGCAGCCCTTGTATTGTCATATTCACTCATATTGCTGAATACAGATCAGCATAATGTACAGGTTAAAAAGAAGATGACAGAAGAGGATTTTATTCGTAATAATAGGCATATAAATGGTGGCAATGATCTGCCTCGAGAGTTCCTATCGGAGCTTTATCATTCAATTTGTAAGAATGAGATCCGCACTACCCCTGATCAAGGTGCTGGATTTCCTGAAATGACTCCAAGTCGGTGGATTGATCTGCTGCACAAATCAAAGAAAACTGCTCCATTTATTGTATCTGATTCCAGATCCTACCTTGATCATGATATGTTTGCTATAATGTCAGGCCCAACAATTGCTGCCATATCTGTGGTATTTGATCATGCTGAACATGAAGAGGTATACCAAACTTGTATGGATGGATTCTTAGCTGTTGCTAAAATTTCAGCTTGCCATCATCTTGAAGATGTTCTGGATGATCTGGTTGTGTCTCTTTGTAAGTTCACTACTCTTTTGAACCCATCATCAGTAGAGGAACCAGTCCTAGCCTTCGGAGATGACACAAAAGCAAGAATGGCAACTGTAACTGTTTTTAGTATTGCTAATAGGTATGGGGATTACATCCGCACTGGATGGAGAAATATACTTGATTGTATCTTAAGATTACACAAGTTAGGACTTCTTCCTGCCCGTGTAGCCAGTGATGCAGCTGATGAGTCGGAGCTTTCTACTGAGACTGGGCACGGGAAGCCTATAACAAATTCTTTGTCATCAGCTCATATGCCATCCATTGGTACTCCGAGGAGATCCTCAGGATTGATGGGGAGGTTTAGTCAGCTCTTGTCTCTTGAAACTGAAGAGCCAAGGTCACAACCTACTGAACAACAACTTGCTGCTCATCAGCGAACCCTACAGACAATACAGAAATGTCACATTGACAGCATATTCACTGAAAGTAAATTTTTGCAAGCTGAATCGCTATTGCAACTTGCAAGAGCGCTTATTTGGGCAGCAGGGTTTCCTCAAAAAGGGAGCAGCACACCTGAGGATGAAGATACTGCTGTGTTCTGCCTAGAGTTGTTGATTGCAATCACTTTGAATAATAGGGATAGAATTGGAATACTTTGGCAGGGTGTGTATGAGCATATTTCCAATATTGTTCAGTCAACTGTAATGCCTTGTGCACTGGTAGAGAAGGCTGTTTTTGGACTTCTAAAGATTTGCCAGCGGTTGCTTCCCTACAAGGAGAGCATTGCTGATGAACTTCTGAGGTCCCTGCAGCTAGTCTTGAAGCTTGATGCTCGAGTTGCCGATGCATACTGTGAGCAGATTACACAGGAAGTAAATCGCCTGGTGAAGGCAAATGCTTCCCATATTAGGTCCCAGTTAGGATGGCGTACAATTACGTCACTACTTTCCATCACAGCAAAGCACCTAGAAGCATCTGAGGTTGGGTTTGAGGCACTATTGTTCATAATGTCAGATGGAGCCCACTTGCTAGCAGCTAATTATGTTCTCTGTGTAGAAGCTGCTAGGCACTTTGCTGAATCTCGAGTTGGACAGGCAGAGCGATCTGTACGGGCACTGGATCTCATGGCAGGGTCTGTTGATTGCTTAGTTCAGTGGACTAGTGAAGCTAGGCAGACAATGGGGGAGGAGGAAGTGTCAAAATTGTCTCACGACATTGGAGAGATGTGGTTAAGGCTAGTGCAGGGACTAAGGAAAGTATGTTTAGACCAGAGAGAGGAGGTTAGAAACCATGCTATATTATCACTGCAGAAGTGCTTGATGGGAGTTGATGGGATTTATCTCTCGCATAGTGTGTGGTTACAGTGTTTTGATCTGGTCATCTTCACTGTGCTTGATAATCTGCTTGACATTGCACAAGGACAGTCTCAAAAGGATTACCGCAACATGGAAGGCACCCTCATCTTTGCCATGAAGCTCTTGTCCAAAGTATATCTTCACTTACTCCAAGACCTATCACAGTTGTCAACATTTTGCAAACTATGGTTGGGGCTGCTGAGCCGAATGGAAAAATATATGAAAGTGAAAGTTAGGGGGAAAAAGAGTGAGAAGCTTCAAGAGCTAGTGCCTGAGCTTCTGAAAAATACCTTACTCGTTATGAAGACGAGGGGCATTCTGGTGCAGAGGAGTGCCTTGGGTGGTGATAGTTTATGGGAATTGACATGGCTACATCTGAATAACATTGCTCCATCACTGCAATCTGAGGTGTATCCTGAGCAGGATTCTGAGCATTCGCAACACGAAAAGGGTGGATCAAATGAAGGTTTGGAGCCTGATGAAACGGGTTCTGTTAGTCCCAATGACACCGCCAAACGTGAAGATTCTGCCGTTGTCGGTTAA 4677 0.4223 MWHLVKLPPYRHCFTYGSCSEGRNPGRDFSVMCPSGFRFMGLTEGSRLFRNPVSANFFEYLIKFVIDIIGQCQGDHGKKLDLSLYAENWTSLILSPANLQAGINAIEEEPEEYDDAYPNKTTLACMINSEIGAVMAVMRRNVRWGGRYMSGDDQLEHSLIQSLKNLKRQIFSWQHQWHAINPALYLQPFLDVIRSDETGAPSTSVALSSVYKILTLDVIDKNTVNVEDAMHLVVDSVTSCRFEVTDPASEEVVLMKILQVFVACMKSKASVMLSNQHVCTLVNTCYRIVHQAGTKSELLQRVARHTMHELIRCIFSHLQDVGNTEHALVNGSSTLKQEVGGLNNEYAFGSEQLENGSMNSEYDNQSLPTDSAPRAATVIDENATIASNGKGNVPYDMHLMTEPYGVPCMVEIFHFLCSLLNAEHVDMGPRSNTIAFDEDVPLFALNLINAAIEMGGPSIRRHPRLLSLVHDELFRSLMQFGLSTSPLILSMVCSIVLNLYHLLRAELKLQLEAFFSCVILRLAQSRYGASYQQQEVAMEAVVDFCGQKTFMVDMYANFDCDITCSNVFEDLANLLSKSAFPVNCPLSSMHTLALDGLIAVIQGMAERIANGSNISEHSPVILEEYTPFWMVKCENYNDPNHWVPFVRRRKYMKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHKFAGTFDFQDMNIDTALRLFLETFRLPGESQKIQRVLEAFSERYYEQSPHILANKDAALVLSYSLILLNTDQHNVQVKKKMTEEDFIRNNRHINGGNDLPREFLSELYHSICKNEIRTTPDQGAGFPEMTPSRWIDLLHKSKKTAPFIVSDSRSYLDHDMFAIMSGPTIAAISVVFDHAEHEEVYQTCMDGFLAVAKISACHHLEDVLDDLVVSLCKFTTLLNPSSVEEPVLAFGDDTKARMATVTVFSIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESELSTETGHGKPITNSLSSAHMPSIGTPRRSSGLMGRFSQLLSLETEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGFPQKGSSTPEDEDTAVFCLELLIAITLNNRDRIGILWQGVYEHISNIVQSTVMPCALVEKAVFGLLKICQRLLPYKESIADELLRSLQLVLKLDARVADAYCEQITQEVNRLVKANASHIRSQLGWRTITSLLSITAKHLEASEVGFEALLFIMSDGAHLLAANYVLCVEAARHFAESRVGQAERSVRALDLMAGSVDCLVQWTSEARQTMGEEEVSKLSHDIGEMWLRLVQGLRKVCLDQREEVRNHAILSLQKCLMGVDGIYLSHSVWLQCFDLVIFTVLDNLLDIAQGQSQKDYRNMEGTLIFAMKLLSKVYLHLLQDLSQLSTFCKLWLGLLSRMEKYMKVKVRGKKSEKLQELVPELLKNTLLVMKTRGILVQRSALGGDSLWELTWLHLNNIAPSLQSEVYPEQDSEHSQHEKGGSNEGLEPDETGSVSPNDTAKREDSAVVG 1558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1226 1558 ProSiteProfiles SEC7 domain profile. 645 834 IPR000904 GO:0005085|GO:0032012
Lele25g1226 1558 CDD Sec7 652 836 IPR000904 GO:0005085|GO:0032012
Lele25g1226 1558 MobiDBLite consensus disorder prediction 1514 1558 - -
Lele25g1226 1558 SMART sec7_5 649 836 IPR000904 GO:0005085|GO:0032012
Lele25g1226 1558 MobiDBLite consensus disorder prediction 1519 1534 - -
Lele25g1226 1558 FunFam ARF guanine-nucleotide exchange factor GNOM 646 728 - -
Lele25g1226 1558 MobiDBLite consensus disorder prediction 1008 1042 - -
Lele25g1226 1558 Gene3D - 646 728 - -
Lele25g1226 1558 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 407 567 IPR032691 -
Lele25g1226 1558 MobiDBLite consensus disorder prediction 1016 1035 - -
Lele25g1226 1558 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 166 1520 - -
Lele25g1226 1558 SUPERFAMILY Sec7 domain 650 842 IPR035999 GO:0005085|GO:0032012
Lele25g1226 1558 FunFam ARF guanine-nucleotide exchange factor GNOM-like 728 846 - -
Lele25g1226 1558 Pfam Sec7 domain 653 836 IPR000904 GO:0005085|GO:0032012
Lele25g1226 1558 Gene3D - 729 846 IPR023394 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1226 Lele-ChrLele25 8148092 8155410 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1226 25 8148092 8155410 Lele28g1235 28 8134465 8144715 hybridization