Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1230 ATGAGGGGACTTACTGTCTTGGATCATGTTCTGAAGGATATACTAAAGGTGATCACACCCTTACAAGAAGATTGGGTGATGCGGTTTGAGAGTATTGAGGAGCTTCGGAGAGTTGTTGAATCTGTGGAGAACTTTAGAGGAGCAACTGTCGAGCCATTTGGATCATTTGTGTCAAATCTCTTCACACGATGGGGTGACTTGGATATTTCAATTGAGCTATCAAATGGTTCTCATATTTCTTCTGCTGGGAAAAAGCGCAAGCAAACGTTATTAGGGGATCTTCTAAGAGCATTAAGGATGAGAGGTGGATGTAGCAGCTTGCAGTTCATCCCCCATGCACGAGTTCCCATTTTAAAATTTAGAAGTAACCGCCAGGGTATATCTTGTGATATTTCAATTGATAACCTGCTCGGTCAAATGAAGTCCAAGCTCTTGCTTTGGATCAGCATGATGGATGACCGCTTCCATGATATGGTTTTACTGGTCAAGGAATGGGCCAAAGCGCATAAGATCAATAACTCAAAAACTGGAACTTTCAACTCCTATTCCCTCAGTTTACTTGTGATATTTCATTTTCAGACATGTGTTCCTGCAATTTTACCCCCACTTAAAGATATATACCCTGGCAACATTGCTGATGATCTTAGAGGTGTTAGGGCCGAGGCTGAGAAACTTATTGAAGAGACATGTCGTAATAACAAGAAAATGTTCTTATCAAACAGAGTCAGACCAATCAACAGGAAACCTTTGTCTGAACTTTTCCTTGAATTCCTAGAAAAGTTTGGAGATATCGATTTCAAGGCAGAATCGGAGGGAATCTGCACATATAATGGACAGTGGGAACTGATAATTAACAACACAAGATGGCAGCCCAAGACTTATGCCATATTTATTGAGGATCCTCTGAAGCAGCCAGAAAATTCTGCAAGGTCTGTCAGCAGAGGACAACTTGCAAAAATAGCCGAGGCTTTCAAGTCGACACACCACAAGCTTACTTCCGGGAATGCGAGCCGTGGTTCTCTGATGAGGGAACTAGTACAACCGCATGTGTCCCAGTTTATGAGAATTTCCGGCAACCCAAGTTACAATGGTGGATACTATCATCATTCAATCCGGCCACAAGCCCTGCCACCGCACAATCATTATGCGATCCGGCCGCAAGGACCGCCGCCACCAAGAGTCATGGTGCAAAGACCCCCACAAAGCAACCGCCATTTTGCGCACTCAAATCAGGAAACATCCTCGAATAATAACGCTTCTAGAGGACATGTGCAGGCTCCTCAACGCCCGCAGATATGGAGGCAGAAGATCCAATAG 1317 0.4404 MRGLTVLDHVLKDILKVITPLQEDWVMRFESIEELRRVVESVENFRGATVEPFGSFVSNLFTRWGDLDISIELSNGSHISSAGKKRKQTLLGDLLRALRMRGGCSSLQFIPHARVPILKFRSNRQGISCDISIDNLLGQMKSKLLLWISMMDDRFHDMVLLVKEWAKAHKINNSKTGTFNSYSLSLLVIFHFQTCVPAILPPLKDIYPGNIADDLRGVRAEAEKLIEETCRNNKKMFLSNRVRPINRKPLSELFLEFLEKFGDIDFKAESEGICTYNGQWELIINNTRWQPKTYAIFIEDPLKQPENSARSVSRGQLAKIAEAFKSTHHKLTSGNASRGSLMRELVQPHVSQFMRISGNPSYNGGYYHHSIRPQALPPHNHYAIRPQGPPPPRVMVQRPPQSNRHFAHSNQETSSNNNASRGHVQAPQRPQIWRQKIQ 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1230 438 MobiDBLite consensus disorder prediction 402 438 - -
Lele28g1230 438 Pfam Nucleotidyltransferase domain 36 149 IPR002934 GO:0016779
Lele28g1230 438 SUPERFAMILY Nucleotidyltransferase 5 149 IPR043519 -
Lele28g1230 438 PANTHER POLY A POLYMERASE CID PAP -RELATED 6 418 - -
Lele28g1230 438 CDD NT_PAP_TUTase 27 149 - -
Lele28g1230 438 Gene3D Beta Polymerase, domain 2 31 151 IPR043519 -
Lele28g1230 438 SUPERFAMILY PAP/OAS1 substrate-binding domain 154 335 - -
Lele28g1230 438 MobiDBLite consensus disorder prediction 383 397 - -
Lele28g1230 438 Gene3D - 152 328 - -
Lele28g1230 438 MobiDBLite consensus disorder prediction 365 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1230 Lele-ChrLele28 8094535 8098307 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g1230 28 8094535 8098307 Lele28g1230 28 8094535 8098307 ECH
Lele25g1222 25 8112937 8116577 Lele28g1230 28 8094535 8098307 hybridization
Lele26g1235 26 8078447 8082150 Lele28g1230 28 8094535 8098307 hybridization