Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1222 ATGAGTGGACATACTGTCTTGGATCATGTTCTGAAGGATATACTTAAGGTGATCATGCCCTTACAAGAAGATTGGGTGATACGGTTTGAGATTATTGAGGATCTACGGAGAGTTGTTGAATCTGTGGAGAACTTTAGAGGTGCAACTGTTGAGCCATATGGATCATTTGTGTCAAATCTCTTCACACGATGGGGTGACTTGGATATTTCAATTGAGCTATCAAATGGTTCTCATATTTCTTCTGCTGGGAAAAAGCGCAAGCAAACGTTATTGGGGGATCTTCTAAGAGCATTAAGGATGAGAGGTGGATGTAGCAGCTTGCAGTTCATCCCCCATGCACGGGTTCCCATTTTAAAATTTAGAAGTAACCGCCAGGGTATATCTTGTGATATTTCAATTGATAACCTGCTGGGCCAAATGAAGTCCAAGCTTCTGCTCTGGATCAGCATGATGGATGACCGCTTCCATGATATGGTTTTACTGGTCAAGGAATGGGCCAAAGCGCATAAGATCAATGACTCAAAAACTGGAACTTTCAACTCCTATTCCCTCAGTTTACTTGTGATATTTCATTTTCAGACATGTGTTCCTGCAATTTTACCCCCACTTAAAGATATATACCCTGGCAACATTTCTGATGATCTTAGAGGTGTCAGGGCTGATGCCGAGAAACTTATTGAAGAAACATGTCGTAATAACATGAAAATGTTCTTATTGGACAGACGCAGACCAATTAACAGGAAACCTTTGTCTGAACTTTTCCTCGAATTCCTAGAAAAGTTTGGCGATATCGATTCCAAGGCAGAATCGGAGGGAATGTGCGCATATAATGGACAGTGGGAAGTGATAATTAACAACACAAGATGGCAGCCCAAGACTTATGCCATATTTATTGAGGATCCTCTGGAGCAGCCAGAAAATTCTGCTAGGTCTGTCAGCAGAGGGCAACTAAAGAAAATAGCCGAGGCTTTCAAGTCAACACACCAGAAGCTTGCTTCTGGCAATGCAAGCCGTGGTTCTCTGATAAGGGAATTGGCACAACCACATGTGTCCCAGTTTATGAGAATTTCCGGCAACCCAGGTTACAATGGTGGATACTATCATCATTCAAACCAGCCCCAAGTCCCACCGCACAATCACCATGTGATCCGGCCACAAGGTCCGCCGCCGCCAAGAGCCATGGTGCAGAGGCCTCCACAAAGCAACCGCCTTACAAATTGGGAAACATCCTCCAACAATAACACTTCTAGAGGACATGTGCAGGCACCTCAACGACCACAGATATGGAGGCAGAAGATTCAATAA 1305 0.4391 MSGHTVLDHVLKDILKVIMPLQEDWVIRFEIIEDLRRVVESVENFRGATVEPYGSFVSNLFTRWGDLDISIELSNGSHISSAGKKRKQTLLGDLLRALRMRGGCSSLQFIPHARVPILKFRSNRQGISCDISIDNLLGQMKSKLLLWISMMDDRFHDMVLLVKEWAKAHKINDSKTGTFNSYSLSLLVIFHFQTCVPAILPPLKDIYPGNISDDLRGVRADAEKLIEETCRNNMKMFLLDRRRPINRKPLSELFLEFLEKFGDIDSKAESEGMCAYNGQWEVIINNTRWQPKTYAIFIEDPLEQPENSARSVSRGQLKKIAEAFKSTHQKLASGNASRGSLIRELAQPHVSQFMRISGNPGYNGGYYHHSNQPQVPPHNHHVIRPQGPPPPRAMVQRPPQSNRLTNWETSSNNNTSRGHVQAPQRPQIWRQKIQ 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1222 434 PANTHER POLY A POLYMERASE CID PAP -RELATED 7 413 - -
Lele25g1222 434 MobiDBLite consensus disorder prediction 398 434 - -
Lele25g1222 434 SUPERFAMILY Nucleotidyltransferase 6 149 IPR043519 -
Lele25g1222 434 MobiDBLite consensus disorder prediction 361 377 - -
Lele25g1222 434 MobiDBLite consensus disorder prediction 382 396 - -
Lele25g1222 434 Gene3D - 152 328 - -
Lele25g1222 434 Gene3D Beta Polymerase, domain 2 30 151 IPR043519 -
Lele25g1222 434 MobiDBLite consensus disorder prediction 361 434 - -
Lele25g1222 434 SUPERFAMILY PAP/OAS1 substrate-binding domain 154 335 - -
Lele25g1222 434 CDD NT_PAP_TUTase 27 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1222 Lele-ChrLele25 8112937 8116577 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1222 25 8112937 8116577 Lele25g1222 25 8112937 8116577 ECH
Lele25g1222 25 8112937 8116577 Lele27g0858 27 16608807 16612382 hybridization
Lele25g1222 25 8112937 8116577 Lele28g1230 28 8094535 8098307 hybridization