Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0812 ATGGCGAATCTCAAAGACTCACATTTTACTGAAAACGAAAGGGGTTCGATTTCGTTCATCGATTTCCCTGAAGATGTCCAGCTTTGTATTCTCTCCTTCCTCACTCCATCTGAAATTGCCGCCTTTGCCTGCACATCGAAGCGATTCGGCTCTCTCTGTAGCAACGATAGCAAACTCTGGTTTAGCCTGTGCGACAGGAAGTGGGGTTCGAAGACACAGATCGCGAAATGGGGCAATGGGAAAATTAGCTACCGCCTTCTGTACAAAACCCTCAACGAATGGGAGAATCTAATTGGCTTTTGGCGTCGAAGCGGACCGGGAAGCATCGCGATTGCATCACCGTCGCTGGTTATCTTCGAGTGGGGCCAATCTTTCCTCGCCGGTTCCAGAGTTTCTCCGTCGAAAACTGCGACCTACGATATATTAAAGTCGCCTTTTTTGCGGATGGGTCTATCGTCGGAAGGACAGGTTGTGAATTTTCTCGATCCCGATGGGCAAACTGAAATGTCCCGTAAATTTGAGATTTCTGAGCAATTTGACATGCCTGGGAATGATCTGATTCCGGTCAATGTTAGTTTTATGGGGAAAACACACTTTGTTGTGGAGGAAAATCAAAACTTTATCCATTTCAATGGTCCAGACCAAAGGAAACATGGATTAAGGAGAAGTTCGAGTAGCACGAATCTGAGTTCAGACGATTGCAATGTTGGAGAAGATATGATTGGTGTCGAAAGTGGATCACCGGGAAGCTTACCAGACAGATTGATTTCAGACATTTATCAGCATTTTGCTAACAGGACAAGCCCTGGTAGTGATAAATCGAGGAAACAAAGGAGGAGAGACAAGGAAAAGCTGGCCAGAAGGAAATGGGAGCCCGAGCATTTCGTGAAGATTGTTAATTGTGCACCCACTCCATCACGCCCATTGCAAGGCCTATGGAAGGGTATTGGTGATGACACGAGTTTAGCCTTTTTTCTTGTGGTGTATGATGACATCGGGGGTGTTGCTTGTCGGCAAGTTGGGAATCCTCCGGAACGATTTCCTAGTCATTCCCCGGTCTTCTGGGCAACAAATGCTACATTTCTAGAATCACCTTTCTCCCCTGAGGAGGAGTATTTATATGACACTCGCATTCATCTCAGGCCAGTTGAAGCAGCCAGTGAGATTCACCGACACTTCCCTTTGACAGAAAATGAAGTGTTAAATGGAATTCTCCCCATAAGCTCAAGCTATGAGCTGATTATTCCAGACCTTGCTGGAACAATGAATCCTAGGAGTGCAGAAGGAAGGATTTGGCAGTACGAGAATGGTACTTTTGGATTTGGCTTCCTTCGGGACAATTTTATAGTAGACCTGAAGCGTATTGCCTATGATGACTGTATTTAG 1386 0.4574 MANLKDSHFTENERGSISFIDFPEDVQLCILSFLTPSEIAAFACTSKRFGSLCSNDSKLWFSLCDRKWGSKTQIAKWGNGKISYRLLYKTLNEWENLIGFWRRSGPGSIAIASPSLVIFEWGQSFLAGSRVSPSKTATYDILKSPFLRMGLSSEGQVVNFLDPDGQTEMSRKFEISEQFDMPGNDLIPVNVSFMGKTHFVVEENQNFIHFNGPDQRKHGLRRSSSSTNLSSDDCNVGEDMIGVESGSPGSLPDRLISDIYQHFANRTSPGSDKSRKQRRRDKEKLARRKWEPEHFVKIVNCAPTPSRPLQGLWKGIGDDTSLAFFLVVYDDIGGVACRQVGNPPERFPSHSPVFWATNATFLESPFSPEEEYLYDTRIHLRPVEAASEIHRHFPLTENEVLNGILPISSSYELIIPDLAGTMNPRSAEGRIWQYENGTFGFGFLRDNFIVDLKRIAYDDCI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0812 461 Pfam F-box domain 21 57 IPR001810 GO:0005515
Lele28g0812 461 MobiDBLite consensus disorder prediction 264 286 - -
Lele28g0812 461 MobiDBLite consensus disorder prediction 211 235 - -
Lele28g0812 461 PANTHER F-BOX ONLY PROTEIN 48-RELATED 4 311 IPR045118 GO:0019005|GO:0031146
Lele28g0812 461 SMART fbox_2 22 62 IPR001810 GO:0005515
Lele28g0812 461 ProSiteProfiles F-box domain profile. 16 63 IPR001810 GO:0005515
Lele28g0812 461 Gene3D - 6 98 - -
Lele28g0812 461 SUPERFAMILY F-box domain 8 92 IPR036047 GO:0005515
Lele28g0812 461 MobiDBLite consensus disorder prediction 269 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0812 Lele-ChrLele28 5223252 5225135 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0815 25 5252010 5253667 Lele28g0812 28 5223252 5225135 hybridization
Lele26g0827 26 5311914 5313349 Lele28g0812 28 5223252 5225135 hybridization