Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0602 ATGCCCACCACTGTTGCATTTCTGTCGGTGCTCTTCTTCGCCGCCTTCCATGTCGCCTTCTCCCTCACCGACGGATTGTTGGCAAACGGGAATTTTGAGCTGGGCCCAAAGCCATCGGACTTGAAAGGCACGGTGGTGACCGGGGGCAGGCTGGCCATACCGGAGTGGGAGATCTCAGGATACATAGAATACATAAGATCGGGTCAAAAACAGGGTGACATGTTGCTGGTTGTACCAGAAGGAGCTTATGCGGTGAGGTTAGGCAACGAAGCCTCCATAAAGCAAAGATTAAAGGTGGTAAAGGGAATGTACTATTCCCTGACATTTGTGGCAGCACGCACATGCGCACAAGAAGAACGATTAAACGTGTCGGTGTCTCCAGATTCAGGAGTTCTTCCAATGCAAACGCTGTATAGCAGCAATGGTTGGGACGCCTATGCCTGGGCCTTTCAAGCTGAGTACCCTGAGGTGGACTTGGTCATTCATAACCCTGGGGTTGAAGAAGACCCTGCTTGTGGGCCACTCATTGATTCCATCGCTCTCAAAGCTCTTTATCCGCCTAAACCCACCAACCGGAACATACTGAAGAATGGTGAATTTGAAGAAGGGCCTTATGTGTTTCCCAACTCATCGTCGGGTGTTTTAATCCCGCCAAACATTGAAGACGACCACTCTCCACTTCCAGGGTGGATGGTGGAGTCGTTGAAGGCGGTGAAGTACATAGATTCAGCGCATTTTTCGGTGCCGCAAGGGAGGAGAGCGGTGGAACTTGTGGCGGGGAAAGAGAGTGTGATAGCGCAGGTGGTGAGGACGATTCCTGGGAAGACGTACGTGCTGTCATTTGCTGTGGGAGACGCGAATAATGCTTGTGAAGGGTCGATGGTTGTGGAAGGATACGCAGGGAAAGACACCATAAAAGTGCCTTATGAGTCCAAAGGCAAAGGTGGGTATAAGCGTGCTGCTCTCAAGTTCGTGGCGGTGAGCACGAGAACACGAGTTATGTTCTTGAGCACGTTCTACACCATGAGAAGCGACGACTACTCTTCTCTGTGTGGACCTGTGATTGATGATGTCAAGTTGCTCACCCTTCGTAAACCATAG 1101 0.5095 MPTTVAFLSVLFFAAFHVAFSLTDGLLANGNFELGPKPSDLKGTVVTGGRLAIPEWEISGYIEYIRSGQKQGDMLLVVPEGAYAVRLGNEASIKQRLKVVKGMYYSLTFVAARTCAQEERLNVSVSPDSGVLPMQTLYSSNGWDAYAWAFQAEYPEVDLVIHNPGVEEDPACGPLIDSIALKALYPPKPTNRNILKNGEFEEGPYVFPNSSSGVLIPPNIEDDHSPLPGWMVESLKAVKYIDSAHFSVPQGRRAVELVAGKESVIAQVVRTIPGKTYVLSFAVGDANNACEGSMVVEGYAGKDTIKVPYESKGKGGYKRAALKFVAVSTRTRVMFLSTFYTMRSDDYSSLCGPVIDDVKLLTLRKP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0602 366 FunFam DUF642 family protein 189 360 - -
Lele28g0602 366 Pfam Protein of unknown function (DUF642) 25 182 IPR006946 -
Lele28g0602 366 Pfam Protein of unknown function (DUF642) 194 360 IPR006946 -
Lele28g0602 366 Gene3D - 189 361 - -
Lele28g0602 366 PANTHER OS02G0527500 PROTEIN-RELATED 8 362 - -
Lele28g0602 366 SUPERFAMILY Galactose-binding domain-like 23 182 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0602 Lele-ChrLele28 3866477 3868302 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0605 25 3841947 3845154 Lele28g0602 28 3866477 3868302 hybridization
Lele26g0618 26 3945519 3947346 Lele28g0602 28 3866477 3868302 hybridization