Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0605 ATGGATAGCAAAATAACTATTTGCAAATCTAATAGCATTTCGAATTTATCAGCTCCTTATTCTCCAAGGAAAATATCGAATATTCTAATTTATGCAAAAGCGACTTCCGGAACTTCAGCTTGGGGCGAAGCTGGGGATGAACATTTGGCATCCACCTACACCAGAAAACACCTAAGATTAATCCGATTTTCTGAGCCCATGCAAGGCATTGCATTTCTGTCGGTGCTACTTTGCACTGCCTTCCATGTCGTCTTCTCCTTCACTGACGGATTGTTGGCAAATGGGAACTTTGAGGCGGGCCCAAAGCCATCGGACATGAAAGGCACGGTGGTGGTTGGCGGCCGCCATGCGATACCGATGTGGGAGATCTCAGGGTTCGTGGAGTACATAAGATCAGGTCAAAAACAAGGAGACATGTTGCTGGTGGTACCAGAAGGAGCTTGTGCAGTGAGGCTTGGCAATGAGGCCAACATCAAGCAAAGAATAAAGGTGGTCAAGGGAATGTACTATTCCATCACATTCATCGCCGCTCGCACATGCGCACAAGACGAACGATTAAACGTGTCAGTGTCTCCAGATTCCGGAGTTCTTCCGATGCAAACAGTGTATAGCGGAGATGGTTGGGACGCCTATGCGTGGGCCTTTCAAGCTGAGTACCCTGAGGTGGACTTGGTCATTCATAACCCCGGCGTAGAAGAAGACCCTGCTTGTGGACCGCTTATTGATTCCATTGCCCTCAAAGCTCTCTACCCTCCAAGATTAACTAACAAAAATATTATAAAGAATGGTGGTTTTGAAGACGGGCCATATGTGTTCCCAAATACAACATGGGGCGTGCTTATCCCACCAAACATTGAAAACGATCATTCACCACTTCCAGGATGGATTGTGGAGTCGTTGAAGGCGGTGAAATATATAGACTCAGAGCATTTCTCAGTTCCAGGAGGAAGAAGAGCGGTGGAGCTTGTTGCAGGTAAAGAAGGTGCCATTGCACAAGTGGTGAGGACGATTCCTGGGAAGACGTACGTGCTGTCTTTTGCAGTGGGAGATGCCGGCGATTCTTGTGAAGGGTCATTGAGCGTGGAAGCATTTGCAGGCAAATACAGTGCCAAAGTGCCTTACGAATCCAAAGGCAAAGGTGGGTATAAGCGTGGGGTTCTTAGGTTTGTGGCTGATAGAACCAGAACACGCATCGTCTTCTTCAGCACATTCTATGGCATGAGAAGCAATGACTTGTCTTCCCTGTGTGGGCCGGTTCTTGATGATGTCAAGTTGCTCAGTCTACGTAAACCATAA 1296 0.4745 MDSKITICKSNSISNLSAPYSPRKISNILIYAKATSGTSAWGEAGDEHLASTYTRKHLRLIRFSEPMQGIAFLSVLLCTAFHVVFSFTDGLLANGNFEAGPKPSDMKGTVVVGGRHAIPMWEISGFVEYIRSGQKQGDMLLVVPEGACAVRLGNEANIKQRIKVVKGMYYSITFIAARTCAQDERLNVSVSPDSGVLPMQTVYSGDGWDAYAWAFQAEYPEVDLVIHNPGVEEDPACGPLIDSIALKALYPPRLTNKNIIKNGGFEDGPYVFPNTTWGVLIPPNIENDHSPLPGWIVESLKAVKYIDSEHFSVPGGRRAVELVAGKEGAIAQVVRTIPGKTYVLSFAVGDAGDSCEGSLSVEAFAGKYSAKVPYESKGKGGYKRGVLRFVADRTRTRIVFFSTFYGMRSNDLSSLCGPVLDDVKLLSLRKP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0605 431 FunFam DUF642 family protein 254 425 - -
Lele25g0605 431 SUPERFAMILY Galactose-binding domain-like 87 247 IPR008979 -
Lele25g0605 431 Gene3D - 254 426 - -
Lele25g0605 431 Pfam Protein of unknown function (DUF642) 259 425 IPR006946 -
Lele25g0605 431 Pfam Protein of unknown function (DUF642) 90 247 IPR006946 -
Lele25g0605 431 PANTHER OS02G0527500 PROTEIN-RELATED 72 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0605 Lele-ChrLele25 3841947 3845154 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0605 25 3841947 3845154 Lele27g1481 27 20855418 20857160 hybridization
Lele25g0605 25 3841947 3845154 Lele28g0602 28 3866477 3868302 hybridization