Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0518 ATGACATCATTCTCTCAGCCTCCCACCTTCAAACCCAATTCCGAAATATCCCTCATGTTGCATCGTAGAACTGTACTTCTGTATCCCCGGTTCGCGGATCAATCTCGCACTGTACTCAAGATGAACGGATCAGTTATACCTTCTCGTCTCCTATATAATCATTTCTTTCAGGTTCGTAGCATTAAAGCTTTGTACTTGTACCATAACTGGCCAGCCTGGTATCAGTTTCTCACAGCGACATGTTGTAAATTAGTTGAAGAAGAGGAAGGGAACTTTGCGTTGTGGCTTTCTTACATTCTCACAGGTGTTGGAGCAAACCTTGTTTCGTGGTTGGTTCTACCGCGAAGTGCAGTTTCAGTAGGAGCTTCTGGTGCAGTTTTTGGATTATTTACAATCAGTGTCATTGTAAAGGTAATGGAAGCGGCCCAAGCATCAACGGCATTATCAGTTGGAGGCTACTTACAATCACATTGCACATCTTTTTGGGGCTCTTGTTGGCGTGCTTTTGGTCTGGCTTCTTAG 522 0.4406 MTSFSQPPTFKPNSEISLMLHRRTVLLYPRFADQSRTVLKMNGSVIPSRLLYNHFFQVRSIKALYLYHNWPAWYQFLTATCCKLVEEEEGNFALWLSYILTGVGANLVSWLVLPRSAVSVGASGAVFGLFTISVIVKVMEAAQASTALSVGGYLQSHCTSFWGSCWRAFGLAS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0518 173 PANTHER RHOMBOID-RELATED PROTEIN 50 155 - -
Lele28g0518 173 SUPERFAMILY Rhomboid-like 64 135 IPR035952 -
Lele28g0518 173 Pfam Rhomboid family 84 145 IPR022764 GO:0004252|GO:0016020
Lele28g0518 173 Gene3D - 47 166 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0518 Lele-ChrLele28 3299293 3301243 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0507 25 3210854 3212865 Lele28g0518 28 3299293 3301243 hybridization
Lele26g0526 26 3337866 3340311 Lele28g0518 28 3299293 3301243 hybridization