Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0526 ATGTTGCCTCGTAGAACTGTACTTCTGTATCCCCGGTTCGCGGATCAATCTCGCACTGTATGCAAGATGAACGGATCAGATCATTTCTTTCAGGTTCGTAGCATTAAAGCTTTGTACTTGTACCATAACTGGCCAGCTTGGTATCAGTTTCTCACAGCGACATGTTGTGTTGGAGCAAACCTTGTTTCGTGGTTGGTTCTACCGCGAAGTGCAGTTTCAGTAGGAGCGTCTGGTGCAGTTTTTGGATTATTTACAATCAGTGTCCTTGTAAAGATTTCATGGGACTGGAGAAAGATTCTTGAAGTGCTTATATTGGGGCAGTTTGTGATAGAGAAGGTAATGGAAGAGGCCCAAGCTTCAACGGCACTATCAGGTGGAGGCTACTTAGTGCAACGTATCAATCACATTGCACATCTTTCTGGGGCTCTCGTTGGCGTGCTTTTGGTCTGGCTTGTTAGCAAAGTGCCCTCTAATCCTTCAGACCAACCGAGCTCAAGTAATTCCCCATTGACGATGATTATGATTTGCGGATATAAGCGAATGTACACAACAGAAAATATTGTTCTTCTACGGAAAATGTGA 582 0.4416 MLPRRTVLLYPRFADQSRTVCKMNGSDHFFQVRSIKALYLYHNWPAWYQFLTATCCVGANLVSWLVLPRSAVSVGASGAVFGLFTISVLVKISWDWRKILEVLILGQFVIEKVMEEAQASTALSGGGYLVQRINHIAHLSGALVGVLLVWLVSKVPSNPSDQPSSSNSPLTMIMICGYKRMYTTENIVLLRKM 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0526 193 Gene3D - 34 158 IPR035952 -
Lele26g0526 193 SUPERFAMILY Rhomboid-like 45 156 IPR035952 -
Lele26g0526 193 Pfam Rhomboid family 50 154 IPR022764 GO:0004252|GO:0016020
Lele26g0526 193 PANTHER RHOMBOID-RELATED PROTEIN 55 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0526 Lele-ChrLele26 3337866 3340311 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0526 26 3337866 3340311 Lele27g1571 27 21497535 21500831 hybridization
Lele26g0526 26 3337866 3340311 Lele28g0518 28 3299293 3301243 hybridization