Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0428 ATGGGCTCACTCGGCAACATCGAGAACATGCCTCTGACTCTGAGCTCCAGGATCTCAACGGTGGTCCCGGCGACGCCACGGAACGAGCAAAACGGTGCTTACGAACTCCAGAACATGGATTTGCTCTTGAAGCTCCATTACATCAGAGCAGCTTATTTCTTCAGCAACGATGCCGTCCAAGGTCTCTCTAACTACGAGTTGAAGAAGGCCATGTTCCCTCTGCTTGAGGCGTACTCTCATGTCTCGGGCCGGATCAGGAGATCCGAGACCGGACGGCCGTTCATCAAGTGCAACGACGCTGGTGTAAGGGTCGCTGAGTCGTACTGTGACAAAACCCTCGCCGAATGGATCGCCGACGCTGGATACTCCATAGACGGCCTCGTTCACGACCACGTCCTTGGCCCTGATCTTGGCTTCTCTCCTCTTGTTTTCGTCCAGTTCACAAGGTTTCGGTGTGGAGGATTGACAGTGGGCCTCAGCTGGCCTCATGTTCTCGGAGACGCTTTCTCTGCTCTCAACTTCATCAATCTTTGGAGTAGGATAATGGCGGGTCACGTGCCTCCCAGGTCTCTTCACGTGCCGACTCCTTCCAAACCTGAGCTTGCTCATTCCGTCTCCGATAAGCCGATATCAGTGAAAAGGTCCGTCGATGTCGGAGAACACTGGCTAGTTGCAGATCACGGGAATGTCAAAAGCCACTCTTTCCGCCTCACGTCGAAACAACTCGATCATTTGGCAACAACAATCAGTACTTCTGCTGCTACTTCGTATTTTGAAATTCTCTCCGCTATAATATGGAAATCTCTCTGTCACATAAGGGGGTCTGCTTCTGGGCTTAGTGCGGTGACGATTTGTGCAAATGGATCTAAGCGGAAAGAAGATGAATTGCCGATCAATGGCTTGGTGTTCAGTAAAGTGGAAGCCGGTTTTGCGGTGGAGAAATCCGATGTGTCAGAATTGGCGATGCTGATTGGCGAGAAGAAGGTGATGGAGAATGGTATCATGGAAAAGATGGTGGAAGCGGATGAAGGAAAAGGGGATTTCATGGTTTATGGAGCGAGCTTGACATTTGTCGATCTGGAAGGAGTTGAGTTTTATGATGTGAAACTGAATGGCCGGAAACCTATTCTGGCGAACTGTACTCTTCACGGAGTGGGCGACGAGGGTGTTGTCTCAGTGCTTCCGGCGCCAGAGGGAGATGTTAATGCTGAAGATGGCGGCGGTAATGGAAGAATTATCACCGTGGCTCTTCCACCGAAACAACTTGAACAGCTGAAGAATAAGCTGGAGAGAGAATGGGGCATTGTTTGA 1311 0.5072 MGSLGNIENMPLTLSSRISTVVPATPRNEQNGAYELQNMDLLLKLHYIRAAYFFSNDAVQGLSNYELKKAMFPLLEAYSHVSGRIRRSETGRPFIKCNDAGVRVAESYCDKTLAEWIADAGYSIDGLVHDHVLGPDLGFSPLVFVQFTRFRCGGLTVGLSWPHVLGDAFSALNFINLWSRIMAGHVPPRSLHVPTPSKPELAHSVSDKPISVKRSVDVGEHWLVADHGNVKSHSFRLTSKQLDHLATTISTSAATSYFEILSAIIWKSLCHIRGSASGLSAVTICANGSKRKEDELPINGLVFSKVEAGFAVEKSDVSELAMLIGEKKVMENGIMEKMVEADEGKGDFMVYGASLTFVDLEGVEFYDVKLNGRKPILANCTLHGVGDEGVVSVLPAPEGDVNAEDGGGNGRIITVALPPKQLEQLKNKLEREWGIV 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0428 436 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 396 - -
Lele28g0428 436 Gene3D - 15 209 IPR023213 -
Lele28g0428 436 Gene3D - 225 429 IPR023213 -
Lele28g0428 436 Pfam Transferase family 19 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0428 Lele-ChrLele28 2649230 2651575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0428 7 429 Acyl Lipid Metabolism Gene Families AT4G24510 40.774 7.08e-101 305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0420 25 2563936 2570480 Lele28g0428 28 2649230 2651575 hybridization
Lele26g0431 26 2650311 2653084 Lele28g0428 28 2649230 2651575 hybridization