Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0420 ATGAAAATTGAGGGAGCGACGTACGATGACGTTGCTCTGGAAATCAATTACGATCTGGACAGTCGGAGGTGGGATAGCCTCAATGAAGACCAAACAGCAGACTCCACCGCCCCACCGCCAACCGGCAACCGCCCTCCTTTACTGCATGGGACCTGTCATCGGGAATCTGGAAAGAAAATCTGGAAAAGGATGGGAGAAACATCATCCAACTTCTCTCTTTTCGCTATGGGTTCACTCGGCAAAATCGAGAACATGCCTCTGACTCTGAGCTCTAGGATCTCAACGGTGGTCCCAGCGACGCCACGGAACGAGCAAAACAGTGCGTACGAACTCCAGAACATGGATTTGCTCTTGAAGCTCCATTACGTCAGAGCAGCTTATTTCTTCAGCAACGATGCTGTCCAAGGTCTCTCAAGCTACGAGTTGAAGAAGGCCATGTTCCCTCTGCTTGACGTGCACTCTCATGTCTCGGGTCGGATCAGGAGATCCGAAACCGGACGGCCGTTCATCAAGTGCAACGACGCCGGTGTACGGGTCGCTGAGTCGTATTCTGACAAACCCCTCGCCGAATGGATCGCCGACGCCGGATACTCCATAGACGGCCTCGTTCAAGACCACGTCCTTGGCCCTGACATTGGCTTCTCTCCTCTTGTTTTCGTCCTGTTTACAAGGTTTCCGTGTGGAGGATTGACCGTGGGCCTCAGCTGGCCTCATGTTCTCGGAGACGCTTTCTCTGCTCTCAACTTCATCAATCTTTGGAGCAGGATAATGGCGGGTCACGTGCCTCCCAGGTATCTTCACGTGCCGAATCCTTCCAAACCTGAGCTTCCTCCTTCGGTCTCCGATAAGCCGATATCAGTGAAAAGGTCCGCCGATGTCGGAGAACACTGGCTAGTTGCAGATCACAGAAATGTCAAAAACCACACTTTCCGCCTCACGTCGAAACAACTCGATCATTTGGTAGCAACGATAAGTACTTCTGCTCCTACTTCGTATTTTGAAATTCTCTCCGCTGTAGTATGGAAATCTCTGTGTCAAATAAGGGGGGATGCTTCTGGACTTAATGCAGTGACGATCTGTACTAATGGGTCTAACAGAAAAGAAGGTGAATTGCCAATCAATGGCTTGGTGTTCAGTAGAGTGGAAGCCGATTTTGTGGTGGAGAAATCCGACGTGTCAGAATTGGCAATGCTGATTGGTGAGAACAAGTTGGTGGAGAACGATATCATGGAAAAGATGGTGGAAGAGGGTGAAGGAAAAGGGGATTTCGTGGTTTATGGAGCGAACTTGACATTTGTCGATTTGGAAGGAGCTGAGTTTTATGGTGTGAAACTGAATGGCCGGAAACCCATTATCGCGAACTGTACTTTTCACGGAGTGGGCGATGAGGGTGTCGTCTCAGTGCTTCCGGGGCCTGAGGGAGATAATAACGCTGAAGATGGCGGCGGTGATGGAAGGATTATCAACGTGGCTCTTCCTCCGAAAGAGCTTGAACAGCTGAAGAATAAGCTGGAGAGAGAATGGGGTATTGTTTGA 1536 0.5013 MKIEGATYDDVALEINYDLDSRRWDSLNEDQTADSTAPPPTGNRPPLLHGTCHRESGKKIWKRMGETSSNFSLFAMGSLGKIENMPLTLSSRISTVVPATPRNEQNSAYELQNMDLLLKLHYVRAAYFFSNDAVQGLSSYELKKAMFPLLDVHSHVSGRIRRSETGRPFIKCNDAGVRVAESYSDKPLAEWIADAGYSIDGLVQDHVLGPDIGFSPLVFVLFTRFPCGGLTVGLSWPHVLGDAFSALNFINLWSRIMAGHVPPRYLHVPNPSKPELPPSVSDKPISVKRSADVGEHWLVADHRNVKNHTFRLTSKQLDHLVATISTSAPTSYFEILSAVVWKSLCQIRGDASGLNAVTICTNGSNRKEGELPINGLVFSRVEADFVVEKSDVSELAMLIGENKLVENDIMEKMVEEGEGKGDFVVYGANLTFVDLEGAEFYGVKLNGRKPIIANCTFHGVGDEGVVSVLPGPEGDNNAEDGGGDGRIINVALPPKELEQLKNKLEREWGIV 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0420 511 Pfam Transferase family 94 504 - -
Lele25g0420 511 MobiDBLite consensus disorder prediction 29 50 - -
Lele25g0420 511 Gene3D - 299 504 IPR023213 -
Lele25g0420 511 Gene3D - 90 288 IPR023213 -
Lele25g0420 511 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 95 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0420 Lele-ChrLele25 2563936 2570480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0420 82 504 Acyl Lipid Metabolism Gene Families AT4G24510 40.541 1.81e-94 291
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0420 25 2563936 2570480 Lele27g1664 27 22140570 22142908 hybridization
Lele25g0420 25 2563936 2570480 Lele28g0428 28 2649230 2651575 hybridization