Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0330 ATGGAAAAAGAGGCAGGGGAAACACATGGAGCACAATCTCAAGCTGTTGAAAAACAGATAGTAGACGATTTCGAAATTCAAAATGAAGATTTAGATAAAGCATTGGATGAGGTAAAAACTCAAATTATTGGCGATGATGGTCCTCCTAAGTTAAACAACAGACAAGATGATATGTCTTTTCATTCAAGTGAGATAACAGACTTTAATTCTAAAACTCATGAAGGAATGGCAGACAACATGGTTGGAAAATCTGATGTTGCTCAGACGATTGATGATTTTAAGGCGTCGCAATGTACATCTCAAGAAGAAAATTTAGAAAACATAACTGGTATAGATGAGTCTTGTTGCAAGGTGTTTGGGAGTGCTTTCCTGAATTCTGAAACACAAAACGAATTTATAAACATTGTGAACTCTAGTTACAAAGTGGATGTGAATGTAGCAGAGTCTAATATTCAAGAAGACAATGTGGATGAAAACTCTTTACAAAATGACTTGGCCAAAGAGATGGAAGATAATAGGAACCTAGAAACAATAGAAGTGAATCAAAAGGCAGATGAATTCTCAAGCCATGCTAGAAGTTTGGAGCTTGTATTTGATAGAAGAAAGGATCTTGAGATGGAAGCTAGCAGTAGCGAATCTACCTGTTATTTGGAAGCTGATCAACAGAATCAGGATATAGGTGAGAAGGAGGGGGCGTTTACAAATATTATTAGGCAAAAAAGTCTAAGAGCAGTCTCTACTCTTCTGCGTCACCTTTCTTGTAAAAGAAACAAAGGTTCTATGTGCATTTCTGACGATGAAGGTAAGGATGTTTTAGAATCACCAAAAGACAGTGAATCCAAAATGGATTTGGAGAAAGAAGCAGAGAGACATGCTTCGAGTCCTATAAATTCTTTTAAGATGTCTTCTGATACTAGTATGGAAAACAACATTGAAGGGCCTCCGCAACCCATAGCTATGAAGGGAAGGGTTATATTGTACTCAAGGTTAGGTTGCCAGGAGTGCAAAGAGGTTAGGCTATTTTTGTACATGAAAAGTCTCAGACATGTTGAAATCAACATTGATGTGTACCCTAGCAGAAAGATGGAGCTGGAGAAGATTTCTGGTAATGCTTCTGTTCCAAAGGTGTTTTTCAGTGAAATACTTATCGGAGGCTTGAGTGAGCTAGAGGCCTTGGATAAGTCTGGCAAGCTTAATGAGAAGATTGACTTTCTCATTACTGAAGCACCAGCATTTGAAGCACCGTTACCGCCGCTTTCTGGAGAGGATGATATGTCTAGTAGTCAAGCTCCAGATGAAATGGCTTTAATTGTTCGAAAAATGAGAGAATCTATTGTTGTGAAGGACCGATTTTGGAGAATGCGCAGGTTCACCAACTGTTTTCTTGGCTCAGAAGCTGTGGACTTTTTATCACGAGATCAATATTTGGAAAGACATGAGGCTGTTCAATTTGCACGAAAGCTTGCAAGCAAACTCTTCTTCCAGCATGTTCTTGATGAGAATCTATTCGAGGATGGTAATCACTTGTATCGATGTTTAGACGATGATCCAATTGTGGCTTCTCAGTGTCACAACATTCCGAGGGGCATAATCACCGTGAAGCCCAAGCCTATAGCAGAAATTGCATCTAGGCTGCGGTTTCTGTCCTACGCAATGTTTGAAGCTTATGCTTCTGAAGATGGGTGTCATATTGATTATAGAAGTCTCCATGGAAGCGAGGAATTTGCAAGGTATCTGAGAATAGTGGAGGAGCTGCAAAGAGTGGAAATAGGGGATATGTGTAGAGAAGAAAAGCTGGCTTTCTTTATTAATCTTTACAACATGATGGCGATCCATGCAATCTTAGTATGGGGTCATCCAGACGGAGCACTGGAAAGAAGGAAATTGTTTGATGATTTCAAATATGTCATAGGTGGGTGCACCTACTCACTTTCATCTATTCAAAATGGCATTTTGAGGGGAAACCAGCGACCCCCATATAACCTTATGAAGCCATTTGGTGTGAAAGATGAGCGTTCAAGGGTGGCTCTCCCTTATGCCGAACCTCTGGTTCATTTCGCTTTAGTTTGTGGGACCCGATCAGGCCCTGCGCTTCGATGTTATTCTCCGGGAGCCATCGATGAAGAATTAACGGATGCGGCCCGCAAATTCATAAGAAGTGGGGGGCTAACAATTGATCTGAATACCAAGGTTGCATACGCTAGTAAGATCCTTAAGTGGTTTAGTACAGATTTTGGTGATGAGGAGGTGGAGGTGCTGAAGCACGTGTCCAATTACTTGAATGCAGCTGAGTCAACAGTGTTACTGGATTGGCTCGCCACTTCTGAATTGAAGGTCGTTTATCAGACTTACGACTGGGCTTTGAATTGCTAG 2373 0.4083 MEKEAGETHGAQSQAVEKQIVDDFEIQNEDLDKALDEVKTQIIGDDGPPKLNNRQDDMSFHSSEITDFNSKTHEGMADNMVGKSDVAQTIDDFKASQCTSQEENLENITGIDESCCKVFGSAFLNSETQNEFINIVNSSYKVDVNVAESNIQEDNVDENSLQNDLAKEMEDNRNLETIEVNQKADEFSSHARSLELVFDRRKDLEMEASSSESTCYLEADQQNQDIGEKEGAFTNIIRQKSLRAVSTLLRHLSCKRNKGSMCISDDEGKDVLESPKDSESKMDLEKEAERHASSPINSFKMSSDTSMENNIEGPPQPIAMKGRVILYSRLGCQECKEVRLFLYMKSLRHVEINIDVYPSRKMELEKISGNASVPKVFFSEILIGGLSELEALDKSGKLNEKIDFLITEAPAFEAPLPPLSGEDDMSSSQAPDEMALIVRKMRESIVVKDRFWRMRRFTNCFLGSEAVDFLSRDQYLERHEAVQFARKLASKLFFQHVLDENLFEDGNHLYRCLDDDPIVASQCHNIPRGIITVKPKPIAEIASRLRFLSYAMFEAYASEDGCHIDYRSLHGSEEFARYLRIVEELQRVEIGDMCREEKLAFFINLYNMMAIHAILVWGHPDGALERRKLFDDFKYVIGGCTYSLSSIQNGILRGNQRPPYNLMKPFGVKDERSRVALPYAEPLVHFALVCGTRSGPALRCYSPGAIDEELTDAARKFIRSGGLTIDLNTKVAYASKILKWFSTDFGDEEVEVLKHVSNYLNAAESTVLLDWLATSELKVVYQTYDWALNC 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0330 790 MobiDBLite consensus disorder prediction 295 312 - -
Lele28g0330 790 Gene3D Glutaredoxin 319 404 - -
Lele28g0330 790 SMART DEP_3 441 514 IPR000591 GO:0035556
Lele28g0330 790 Coils Coil 158 178 - -
Lele28g0330 790 SUPERFAMILY Thioredoxin-like 318 402 IPR036249 -
Lele28g0330 790 ProSiteProfiles Glutaredoxin domain profile. 312 413 - -
Lele28g0330 790 SUPERFAMILY "Winged helix" DNA-binding domain 433 521 IPR036390 -
Lele28g0330 790 Pfam Protein of unknown function, DUF547 593 718 IPR006869 -
Lele28g0330 790 Gene3D - 428 518 IPR036388 -
Lele28g0330 790 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 110 790 - -
Lele28g0330 790 ProSiteProfiles DEP domain profile. 441 514 IPR000591 GO:0035556
Lele28g0330 790 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 445 511 IPR000591 GO:0035556
Lele28g0330 790 MobiDBLite consensus disorder prediction 265 315 - -
Lele28g0330 790 MobiDBLite consensus disorder prediction 265 293 - -
Lele28g0330 790 Pfam Glutaredoxin 324 379 IPR002109 -
Lele28g0330 790 CDD DEP 437 511 - -
Lele28g0330 790 Coils Coil 21 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0330 Lele-ChrLele28 1990758 1994463 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0347 01 2034695 2035330 Lele28g0330 28 1990758 1994463 CCT
Lele02g0343 02 1977733 1978359 Lele28g0330 28 1990758 1994463 CCT
Lele03g0356 03 2031945 2032574 Lele28g0330 28 1990758 1994463 CCT
Lele04g0352 04 2083258 2083884 Lele28g0330 28 1990758 1994463 CCT
Lele26g0328 26 1967128 1971060 Lele28g0330 28 1990758 1994463 hybridization