Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0328 ATGGAAAAAGAGGCAGGGGAAACACATGGAGCACAATCTCAAGCTGTTGAAAAACAGATAGTAGATGATTTAGAAATTCAAAATGAAGATTTAGATAAACCATTGGATGAGGTAAAAACTCAAATTATTGGCGATGATGGTCCTCCTGAGTTAAATAACAGACAAGATGATATGTCTTTTCATTCAAGTGAGATAACAGACTTTAATTCTAAAACTTATGAAGGAATGGCAGACAACATGGTTGGAAAATCTGATGTTGCTCAGACGATTGATGATTTTAAGGCGTTGCAATGTACATCTCAAGAAGAAAATTTAGAAAACATAACTGGTATAGATGAGTCTTGCTGCAAGGTGGTTGGGAGTGCTTTCCTGAATTCTGAAACACAAAACGAATTTATAAACATTGTGAACTCTAGTTACAAAGTGGATGTGAATGTGGCAGAGTCTAATATTCAAGAAAACAATGTGGATGAAAAGTCTTTACAAAATGACTCGGCCAAAGAGATGGAAGATAATAGGAACCTAGAAACAATAGAAGTTAATCAAAAGGCAGATGAATTCTCAAGCCATGATAGAAGTTTGGAGCTTGTATTTGATAGAAGAAAGGATCTGGAGATGGAAGCTAGCAGTAGCGAATCTACCTGTTATTTGGAAGCTGATCAACAGAATCAGGATATAGGTGAGAAGGAGGGGGCGTTTAAAAATATTATAAGGCAAAAAAGTCTAAGAGCAGTCTCTACTCTTCTGCGTCACCTTTCAGGTAAAAGAAACAAAGGTTCTATGTGCATTTCTGATGATGAAGGTAAGGATGTTTTAGAATCACCAAAAGACAGTGAATCCAAAATGGATTTGGAGAAAGAAGCAGAGAGACATGCTTCGAGTCCTATAAATTCTTTTAAGATATCTTCTGATATTAGTATGGAAAACAAAATTGAAGGGCCTCCACAACCCTTAGCTATGAAGGGAAGGGTTATATTGTACTCAAGGTTAGGTTGCCAGGAGTGCAAAGAGGTTAGGCTATTTTTGTACATGAAAAGTCTCAGATATGTTGAAATCAACATTGATGTGTACCCTAGTAGAAAGATGGAGCTGGAGAAGATTTCTGGTAATGCTTCTGTTCCAAAGGTGTTTTTCAGTGAAATACTTATCGGAGGCTTGAGTGAGCTAAAGGCCTTGGATAAGTCTGGCAAGCTTACTGAGAAGATTGACTTTCTCATTACTGAAGCACCAGCATTTGAAGCACCGTTACCGCCGCTTTCTGGAGAGGATGATATGTCTATTAGTCAAGCTCCAGATGAAATGGCTTTAATTGTTCGAAAAATGAGAGAATCTATTGTTGTGAAGGACCGATTTTGGAGAATGCGCAGGTTCACTAACTGTTTTCTTGGCTCAGAAGCTGTGGACTTTTTATCACAAGATCAATATTTGGAAAGACATGAGGCTGTTCAATTTGCACGAAAGCTTGCAAGCAAACTCTTCTTCCAGCATGTTCTTGGTGAGAATCTATTCGAGGATGGTAATCACTTGTATCGATGTTTAGACGATGATCCAATTGTGGCGTCTCAGTGTCACAACATTCCGAGGGGCATAATCACCGTGAAGCCCAAGCCTATAGCAGAAATTGCATCTAGGCTGAGGTTTCTGTCCTACGCAATGTTTGAAGCTTATGCTTCTGAAGATGGGCATCATATTGATTATAGAAGTCTCCATGGAAGCGAGGAATTTGCAAGGTATCTGAGAATTGTGGAGGAGCTGCAAAGAGTGGAAATAGGGGAGATGTGTAGAGAAGAAAAGTTGGCTTTCTTTATTAATCTTTACAACATGATGGCGATCCATGCAATCTTAGTATGGGGTCATCCAGACGGAGCACTGGAAAGAAGGAAATTGTTTGATGATTTCAAGTATGTCATAGGTGGGTGCACCTACTCACTTTCATCTATTCAAAATGGCATTTTGAGGGGAAACCAGCGACCCCCATATAACCTTATGAAGCCATTTGGTGCGAAAGATGAGCGTTCAAGGGTGGCTCTCCCTTATGCCGAGCCTCTGGTTCATTTCGCTTTAGTTTGTGGGACCCGATCAGGCCCTGCGCTTCGTTGTTATTCTCCTGGAGCCATCGATGAAGAATTAACGGATGCGGCCCGCAAATTCATAAGAAGTGGGGGGCTAACAATTGATCTGAATACCAAGGTTGCATACGCTAGTAAGATCCTCAAGTGGTTTAGTACAGATTTTGGGGATGAGGAGGTGGAGGTGCTGAAGCACGTGTCCAATTACTTGAATGCAGCTGAGTCAACAGTGTTACTGGATTGGCTCGCCACTTCTGAATTGAAGGTCGTTTATCGGACTTACGACTGGGCTTTGAATTGCTAG 2373 0.4058 MEKEAGETHGAQSQAVEKQIVDDLEIQNEDLDKPLDEVKTQIIGDDGPPELNNRQDDMSFHSSEITDFNSKTYEGMADNMVGKSDVAQTIDDFKALQCTSQEENLENITGIDESCCKVVGSAFLNSETQNEFINIVNSSYKVDVNVAESNIQENNVDEKSLQNDSAKEMEDNRNLETIEVNQKADEFSSHDRSLELVFDRRKDLEMEASSSESTCYLEADQQNQDIGEKEGAFKNIIRQKSLRAVSTLLRHLSGKRNKGSMCISDDEGKDVLESPKDSESKMDLEKEAERHASSPINSFKISSDISMENKIEGPPQPLAMKGRVILYSRLGCQECKEVRLFLYMKSLRYVEINIDVYPSRKMELEKISGNASVPKVFFSEILIGGLSELKALDKSGKLTEKIDFLITEAPAFEAPLPPLSGEDDMSISQAPDEMALIVRKMRESIVVKDRFWRMRRFTNCFLGSEAVDFLSQDQYLERHEAVQFARKLASKLFFQHVLGENLFEDGNHLYRCLDDDPIVASQCHNIPRGIITVKPKPIAEIASRLRFLSYAMFEAYASEDGHHIDYRSLHGSEEFARYLRIVEELQRVEIGEMCREEKLAFFINLYNMMAIHAILVWGHPDGALERRKLFDDFKYVIGGCTYSLSSIQNGILRGNQRPPYNLMKPFGAKDERSRVALPYAEPLVHFALVCGTRSGPALRCYSPGAIDEELTDAARKFIRSGGLTIDLNTKVAYASKILKWFSTDFGDEEVEVLKHVSNYLNAAESTVLLDWLATSELKVVYRTYDWALNC 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0328 790 Pfam Protein of unknown function, DUF547 593 718 IPR006869 -
Lele26g0328 790 ProSiteProfiles DEP domain profile. 441 514 IPR000591 GO:0035556
Lele26g0328 790 MobiDBLite consensus disorder prediction 257 293 - -
Lele26g0328 790 MobiDBLite consensus disorder prediction 260 293 - -
Lele26g0328 790 SUPERFAMILY "Winged helix" DNA-binding domain 432 521 IPR036390 -
Lele26g0328 790 Gene3D Glutaredoxin 319 404 - -
Lele26g0328 790 SMART DEP_3 441 514 IPR000591 GO:0035556
Lele26g0328 790 Gene3D - 426 518 IPR036388 -
Lele26g0328 790 SUPERFAMILY Thioredoxin-like 318 403 IPR036249 -
Lele26g0328 790 MobiDBLite consensus disorder prediction 1 53 - -
Lele26g0328 790 Pfam Glutaredoxin 324 379 IPR002109 -
Lele26g0328 790 MobiDBLite consensus disorder prediction 22 40 - -
Lele26g0328 790 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 139 790 - -
Lele26g0328 790 CDD DEP 437 511 - -
Lele26g0328 790 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 445 511 IPR000591 GO:0035556
Lele26g0328 790 ProSiteProfiles Glutaredoxin domain profile. 312 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0328 Lele-ChrLele26 1967128 1971060 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0347 01 2034695 2035330 Lele26g0328 26 1967128 1971060 CCT
Lele02g0343 02 1977733 1978359 Lele26g0328 26 1967128 1971060 CCT
Lele03g0356 03 2031945 2032574 Lele26g0328 26 1967128 1971060 CCT
Lele04g0352 04 2083258 2083884 Lele26g0328 26 1967128 1971060 CCT
Lele26g0328 26 1967128 1971060 Lele28g0330 28 1990758 1994463 hybridization