Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0317 ATGATTCCATTACGTCACGATCAAACCCAAGAGGAAAGAGGAAAGGGGGAAAAGGATACGGTGTTACCTACTTATCACAACACAGACGACTCCGAGGGAAAAGGGCGGGGGTATATTCCTAATACAATTAATGCCATTGCTGTGCGTTATTCTGATCGCATCGTGTATAAATATAGGCGTATTTATGAGGCACTTGAGCGGGAAGCAGGATCCCAAAGGAAAATTCGGCCTCTCCGAGTAAATTTTGACACATCTAACTCTTGTTCCTTTCGCACTCTTTACGTTACCAATGAGGAATACCCTTCCCCATACATTGCATTCACTGTTGCCACCATATACCGGAAAATGCGCCAGCCGCTACTGCCTCATGATTCCACTGACATCCCTTCCGCTCCTACCCTCAAGAAATCTGACGCTGACAAGGTAGACAAAGAGGACCATACGCCCTCCTCACCTCTCCTTCTGGTTGGCCGGAATCGCTCCCAGGCCGGCAACCGGAGGGTCACGCCCACCGGAATACCCGCGGGGGCCAATATCGCGGACTCCATTGTTGAGAACCTTCTGCCCAACGGTGATTTTTTTGTGGGTACCTTCTCCGTGAACGTTCCTCACGGATCCGGGAAGTACCTGTGGACGGACGGGTGCATGTACGAGGGGGAGTGGAAGAGAGGCAAGGCGGCTGGGAAAGGCAAATTCTCTTGGCCTTCCGGGGCTACCTATGAAGGCGAATTCAAATCGGGTCGAATGGAGGGATTCGGGACTTTTGTTGGATCTGACGGCGACACCTACAGCGGCTCCTGGATCGGCGATCGGAAACACGGGTACGGCCAGAAACGCTACGCCAACGGCGATTTCTATGAAGGGTCGTGGAAGCGGAACCTGCAGGATGGGCAGGGAAGGTATGTGTGGAGGAATGGGAACGAGTATGTGGGCGAGTGGAAGAATGGTGTGATGTCTGGGAGAGGCGCGTTGATATGGGCGAATGGGAATCGCTACGAAGGACAATGGGAGAACGGCGTTCCGAAAGGGCAGGGGATTTTCACATGGCCTGATGGGAGCTGCTATATTGGCATCTGGAACAAGGATTTGAAGATACAGCAACTGAATGGAACTTTTTACCCTGGCAATGGGAAAGAGCACAATTTCAAGGGCAACGGGCCGTTCAAGACTGATAATTTTTCTATAACAATGAGCAAGACGTCGTCCGTGGATAATACCAGAGGAAGCGTGAGTGAGAAGATTTTTCCTAGGATATGCATATGGGAATCCGATGGAGAAGCTGGTGATATAACCTGCGATATCATCGATAATGTGGAAGCATCCATGTTCTATCAGCGTGCAACGGGATTTGATCCTCATGAGATAAAGCAGTTTCGGCGCAATTCTCTCAGCTTCTCCAGTGAGGTGAAACGACCAGGACAAACAATATGCAAAGGGCATAAGAATTATGACTTGATGATTAATCTACAATTGGGTATGAGGCACTCTATTGGGAAGGAAGCTTCAGTATTCCGTGACCTTAAACATAGTGATTTTGATCCAAAGGCGAAGTTCTGGACTAGGTTTCCGCCTGAAGGATCAAAGATAACGCCACCACATCAGTCAGCGGAGTTCCGCTGGAAAGATTACTGCCCCATGGTCTTTAGACGATTAAGGAAGCTATTCCAGGTGGATCCTGTTGATTACGTGTTAGCTATATGCGGGGATGATGCTCTCCGGGAGCTTTCATCTCCGGGGAAGAGTGGAAGCCTCTTCTACTTGACCCAAGACGACAGATTTATGATAAAAACAATGAAGAAATCGGAAGTCAAGGTGCTTCTAAGAATGCTTCGAAGTTATTATCAGCATGTTTCTCAATATGAAAACTCACTTTTGACAAAATTTTATGGATTGCATTGCGTCAAACCAATTGGAGGCCAAAAGACCCGGTTTATCGTAATGGGCAATCTTTTCTGCTCTGAATATCCAATCCATAGACGGTTTGACTTGAAGGGATCATCTCATGGCCGCACAATAGATAAGCGGGAAGAGGAGATCGATGAAACTACAACCCTCAAAGACCTTGACCTCAATTTTGTATTTCGTCTCCAGCAATGTTGGTTTCAGAAGCTAATCAAACAAATTGAGCTGGATTGTAAGTTCTTGGAAGCAGAGAGAATCATGGATTACAGTCTTTTGGTAGGCCTCCACTTCCGGGAAGATAACAGATATGACAAAATGGGGTTGTCTCCATTTGTTTTGCGCACTGGCAAGCGAGATTCTTATCAGAGTGAGAAGTTCATGCGCGGTTGTCGCTTCCTTGAAGCAGAGCTTCAAGATCGGGATCGAGTCAAATCTGGCAGGAAATCATTGATTAGATTAGGAGCCAATATGCCGGCCAGGGCAGAGCCTATGGCAAGGAGGAGTGATTTTGATCAATACTTGATGGACGGAATCAGCCATTTGATCCCAAGTCGGTGCGGAGAGACATGCGACGTGGTCTTATATTTTGGGATTATAGATATTTTGCAAGATTACGATATCAGCAAGAAATTAGAGCATGCCTACAAATCGTTGCAAGCCAAACCCTCATCAATCTCGGCCGTGGATCCAAAGCTTTACTCCAATAGATTCCGTGATTTCGTGGGGAGAATATTCATCGAAGACAGATAG 2652 0.4732 MIPLRHDQTQEERGKGEKDTVLPTYHNTDDSEGKGRGYIPNTINAIAVRYSDRIVYKYRRIYEALEREAGSQRKIRPLRVNFDTSNSCSFRTLYVTNEEYPSPYIAFTVATIYRKMRQPLLPHDSTDIPSAPTLKKSDADKVDKEDHTPSSPLLLVGRNRSQAGNRRVTPTGIPAGANIADSIVENLLPNGDFFVGTFSVNVPHGSGKYLWTDGCMYEGEWKRGKAAGKGKFSWPSGATYEGEFKSGRMEGFGTFVGSDGDTYSGSWIGDRKHGYGQKRYANGDFYEGSWKRNLQDGQGRYVWRNGNEYVGEWKNGVMSGRGALIWANGNRYEGQWENGVPKGQGIFTWPDGSCYIGIWNKDLKIQQLNGTFYPGNGKEHNFKGNGPFKTDNFSITMSKTSSVDNTRGSVSEKIFPRICIWESDGEAGDITCDIIDNVEASMFYQRATGFDPHEIKQFRRNSLSFSSEVKRPGQTICKGHKNYDLMINLQLGMRHSIGKEASVFRDLKHSDFDPKAKFWTRFPPEGSKITPPHQSAEFRWKDYCPMVFRRLRKLFQVDPVDYVLAICGDDALRELSSPGKSGSLFYLTQDDRFMIKTMKKSEVKVLLRMLRSYYQHVSQYENSLLTKFYGLHCVKPIGGQKTRFIVMGNLFCSEYPIHRRFDLKGSSHGRTIDKREEEIDETTTLKDLDLNFVFRLQQCWFQKLIKQIELDCKFLEAERIMDYSLLVGLHFREDNRYDKMGLSPFVLRTGKRDSYQSEKFMRGCRFLEAELQDRDRVKSGRKSLIRLGANMPARAEPMARRSDFDQYLMDGISHLIPSRCGETCDVVLYFGIIDILQDYDISKKLEHAYKSLQAKPSSISAVDPKLYSNRFRDFVGRIFIEDR 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0317 883 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 202 879 IPR023610 -
Lele28g0317 883 MobiDBLite consensus disorder prediction 1 33 - -
Lele28g0317 883 FunFam Phosphatidylinositol 4-phosphate 5-kinase 224 268 - -
Lele28g0317 883 Gene3D - 196 246 - -
Lele28g0317 883 Gene3D - 339 413 - -
Lele28g0317 883 Gene3D - 292 338 - -
Lele28g0317 883 Gene3D - 247 291 - -
Lele28g0317 883 CDD PIPKc_AtPIP5K_like 482 878 - -
Lele28g0317 883 SMART morn 215 236 IPR003409 -
Lele28g0317 883 SMART morn 330 351 IPR003409 -
Lele28g0317 883 SMART morn 238 259 IPR003409 -
Lele28g0317 883 SMART morn 307 328 IPR003409 -
Lele28g0317 883 SMART morn 192 213 IPR003409 -
Lele28g0317 883 SMART morn 261 282 IPR003409 -
Lele28g0317 883 SMART morn 284 305 IPR003409 -
Lele28g0317 883 FunFam Phosphatidylinositol 4-phosphate 5-kinase 468 649 - -
Lele28g0317 883 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 189 306 - -
Lele28g0317 883 MobiDBLite consensus disorder prediction 122 170 - -
Lele28g0317 883 Gene3D - 650 879 - -
Lele28g0317 883 SMART PIPK_2 508 880 IPR002498 GO:0016307|GO:0046488
Lele28g0317 883 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 468 649 IPR027484 -
Lele28g0317 883 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 479 879 IPR002498 GO:0016307|GO:0046488
Lele28g0317 883 MobiDBLite consensus disorder prediction 154 168 - -
Lele28g0317 883 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 280 378 - -
Lele28g0317 883 SUPERFAMILY SAICAR synthase-like 478 879 - -
Lele28g0317 883 MobiDBLite consensus disorder prediction 134 148 - -
Lele28g0317 883 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 567 877 IPR002498 GO:0016307|GO:0046488
Lele28g0317 883 Pfam MORN repeat 217 238 IPR003409 -
Lele28g0317 883 Pfam MORN repeat 309 331 IPR003409 -
Lele28g0317 883 Pfam MORN repeat 240 262 IPR003409 -
Lele28g0317 883 Pfam MORN repeat 263 284 IPR003409 -
Lele28g0317 883 Pfam MORN repeat 286 307 IPR003409 -
Lele28g0317 883 Pfam MORN repeat 195 216 IPR003409 -
Lele28g0317 883 Pfam MORN repeat 332 353 IPR003409 -
Lele28g0317 883 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0317 Lele-ChrLele28 1893597 1897868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0317 150 882 Acyl Lipid Metabolism Gene Families AT1G21980 71.526 0.0 1085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0303 25 1821869 1825413 Lele28g0317 28 1893597 1897868 hybridization
Lele26g0315 26 1861271 1864959 Lele28g0317 28 1893597 1897868 hybridization