Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0303 ATGTTTATACATGACCGGAAAATGCGCCATCCGCTGCTGCCTCATGATTCCACTGACCTCCCTTCCGCCCCTACCCTCAAGAAATCTGACGCGGACAAGGTAGACAGAGAGGCCCATACGCCCTCTTCGCCTCTTCTTCTGGTTGGCCGGAATCGCTCCCAGGCCGGCAACAGGAGGGTGGCGCCTACCGGAATACCCGCGTTGGCTGGTGTTGCGGACTCCATTGTCGAGAACCTCCTGCCCAACGGTGATTTTTTTGTGGGTACCCACTCTGGGAACGTTCCTCACGGATCCGGGAAGTACCTGTGGACGGACGGGTGCATGTACGAGGGGGAGTGGAAGAGAGGCAAGGCGGCTGGGAAAGGCAAATTCTCTTGGCCTTCGGGGGCTACCTATGAAGGCGAATTCAAATCGGGTCGGATGGAGGGATTCGGGACTTTTGTTGGATCTGACGGCGACACCTTCCGTGGCTCCTGGATCGGCGATCGGAAGCACGGGTACGGCAAGAAACGCTATGCCAACGGCGATTTCTATGAAGGGTCGTGGAAGCGGAACCTGCAGGATGGGCAGGGAAGGTATGTGTGGAGGAATGGGAACGAGTATGTGGGCGAGTGGAAGAACGGTGTGATGTCTGGGAGAGGCGCGTTGCTATGGACGAATGGGAATCGCTACGAAGGACAGTGGGAGAACGGGGTTCCGAGAGGGCAGGGGATTTTCACATGGCCTGATGGTAGTTGCTATATTGGCATCTGGAACAAGGATTTGAAAATACAGCAATTGAACGGAACTTTTTACCCTGGCAATGGGAAAGAGCACTATTTCAAGGGTAACGGGCCGTTCAAGACTGATAATTTTACTATAACAATGAGCAAGACGTCGTCCGTGGATAATACCAGAGGAAGCGTGAGTGAGAAGAATTTTCCGAGGATATGCATATGGGAATCCGATGGAGAAGCTGGTGATATAACTTGTGATATCATAGATAATGTGGAAGCATCCATGTTCTATCAGCGTGCAACGGGATTTGATCCACATGAGATAAAGCAATTTCGGCGCAATTCTCTCCGCTTCTCCAATGAGGTGAAACGACCAGGACAAACAATATGCAAAGGGCACAAGACTTATGACTTAATGATTAATCTACAATTGGGTATAAGGTACTCTATTGGGAAGGAAGCTTCAATAGTCCGTGAACTTAAACATAGTGATTTTGATCCAAAGGAGAAGTTCTGGACGAGGTTTCCGCCTGAAGGATCCAAGATAACTCCCCCACATCAATCAGCGGAGTTCCGCTGGAAAGATTACTGCCCCATCGTCTTTAGACAATTAAGGAAGCTATTCCAGGTGGATCCTGTTGATTACATGTTAGCTATATGTGGGGATGATGCTCTCCGGGAGCTTTCATCTCCGGGGAAGAGTGGAAGCCTCTTCTACTTGACCCAAGACGACAGATTTATGATAAAAACAGTGAAGAAATCGGAAGTTAAGGTGCTTCTAAGAATGCTTCGAAGTTATTACCAACATGTTTCTCAATATGAAAACTCACTCTTGACAAAATTTTATGGACTGCATTGCGTCAAACCAATTGGAGGGCAAAAGACCCGGTTTATTGTAATGGGCAATCTTTTCTGCTCGGAATATCCAATCCATAGACGGTTTGACTTGAAGGGATCATCTCATGGCCGCACAATAGATAAGCGGGAGGAGGAGATTGATGAAACTACAACCCTCAAAGACCTTGATCTCAATTTTGTATTTCGTCTCCAGCATTGTTGGTTTCAGAAGCTAATCAAACAAATTGAGCTCGATTGTAAGTTCTTGGAAGCAGAGAGAATCATGGATTACAGTCTTTTGGTAGGCCTCCACTTACGTGAAGATAACAGATATGACAAAATGGGGTTGTCTCCGTTTGTTTTGCGCACTGGCAAGAGAGATTCTTATCAGAGTGAGAAGTTCATGCGCGGTTGTCGCTTCCTTGAAGCAGAGCTTCAAGATCGGGATCGAGTCAAATCTGGCAGGAAATCATTGATTAGATTAGGGGCCAATATGCCGGCAAGGGCAGAGCCGATGGCAAGGAGGAGTGATTTTGATCAATACTTGATGGACGGAATCAGCCATTTGATCCCAAGTCGGTGCGGAGAGACGTGCGACGTGGTCTTATATTTTGGGATTATAGATATTTTGCAAGATTATGATATAAGCAAGAAGTTAGAGCACGCCTACAAATCGTTGCAAGCCAAACCCTCATCAATCTCGGCTGTGGATCCAAAGCTTTACTCCAGGAGATTCCGTGATTTCGTGGGGAGAATATTCATCGAAGACAGGTAG 2328 0.4764 MFIHDRKMRHPLLPHDSTDLPSAPTLKKSDADKVDREAHTPSSPLLLVGRNRSQAGNRRVAPTGIPALAGVADSIVENLLPNGDFFVGTHSGNVPHGSGKYLWTDGCMYEGEWKRGKAAGKGKFSWPSGATYEGEFKSGRMEGFGTFVGSDGDTFRGSWIGDRKHGYGKKRYANGDFYEGSWKRNLQDGQGRYVWRNGNEYVGEWKNGVMSGRGALLWTNGNRYEGQWENGVPRGQGIFTWPDGSCYIGIWNKDLKIQQLNGTFYPGNGKEHYFKGNGPFKTDNFTITMSKTSSVDNTRGSVSEKNFPRICIWESDGEAGDITCDIIDNVEASMFYQRATGFDPHEIKQFRRNSLRFSNEVKRPGQTICKGHKTYDLMINLQLGIRYSIGKEASIVRELKHSDFDPKEKFWTRFPPEGSKITPPHQSAEFRWKDYCPIVFRQLRKLFQVDPVDYMLAICGDDALRELSSPGKSGSLFYLTQDDRFMIKTVKKSEVKVLLRMLRSYYQHVSQYENSLLTKFYGLHCVKPIGGQKTRFIVMGNLFCSEYPIHRRFDLKGSSHGRTIDKREEEIDETTTLKDLDLNFVFRLQHCWFQKLIKQIELDCKFLEAERIMDYSLLVGLHLREDNRYDKMGLSPFVLRTGKRDSYQSEKFMRGCRFLEAELQDRDRVKSGRKSLIRLGANMPARAEPMARRSDFDQYLMDGISHLIPSRCGETCDVVLYFGIIDILQDYDISKKLEHAYKSLQAKPSSISAVDPKLYSRRFRDFVGRIFIEDR 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0303 775 CDD PIPKc_AtPIP5K_like 375 770 - -
Lele25g0303 775 PIRSF PIP5K_plant 277 775 IPR017163 GO:0005524|GO:0016308
Lele25g0303 775 PIRSF PIP5K_plant 66 287 IPR017163 GO:0005524|GO:0016308
Lele25g0303 775 SUPERFAMILY SAICAR synthase-like 370 771 - -
Lele25g0303 775 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 172 270 - -
Lele25g0303 775 FunFam Phosphatidylinositol 4-phosphate 5-kinase 360 541 - -
Lele25g0303 775 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 371 771 IPR002498 GO:0016307|GO:0046488
Lele25g0303 775 SMART morn 176 197 IPR003409 -
Lele25g0303 775 SMART morn 153 174 IPR003409 -
Lele25g0303 775 SMART morn 84 105 IPR003409 -
Lele25g0303 775 SMART morn 130 151 IPR003409 -
Lele25g0303 775 SMART morn 199 220 IPR003409 -
Lele25g0303 775 SMART morn 222 243 IPR003409 -
Lele25g0303 775 SMART morn 107 128 IPR003409 -
Lele25g0303 775 SMART PIPK_2 400 772 IPR002498 GO:0016307|GO:0046488
Lele25g0303 775 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 459 769 IPR002498 GO:0016307|GO:0046488
Lele25g0303 775 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 94 771 IPR023610 -
Lele25g0303 775 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 360 541 IPR027484 -
Lele25g0303 775 Gene3D - 542 771 - -
Lele25g0303 775 FunFam Phosphatidylinositol 4-phosphate 5-kinase 116 160 - -
Lele25g0303 775 Gene3D - 139 184 - -
Lele25g0303 775 Gene3D - 88 138 - -
Lele25g0303 775 Gene3D - 230 306 - -
Lele25g0303 775 Gene3D - 185 229 - -
Lele25g0303 775 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 81 199 - -
Lele25g0303 775 Pfam MORN repeat 91 108 IPR003409 -
Lele25g0303 775 Pfam MORN repeat 178 199 IPR003409 -
Lele25g0303 775 Pfam MORN repeat 224 245 IPR003409 -
Lele25g0303 775 Pfam MORN repeat 132 154 IPR003409 -
Lele25g0303 775 Pfam MORN repeat 109 130 IPR003409 -
Lele25g0303 775 Pfam MORN repeat 201 223 IPR003409 -
Lele25g0303 775 Pfam MORN repeat 155 176 IPR003409 -
Lele25g0303 775 MobiDBLite consensus disorder prediction 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0303 Lele-ChrLele25 1821869 1825413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0303 42 774 Acyl Lipid Metabolism Gene Families AT1G21980 71.662 0.0 1083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0303 25 1821869 1825413 Lele27g1783 27 22915581 22919078 hybridization
Lele25g0303 25 1821869 1825413 Lele28g0317 28 1893597 1897868 hybridization