Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0238 ATGGGCACTTACTATCGGAATCAGAGACGGAGGGATCGCCGTCCTTGTGATCCTGGTCATATTGTTCTTCGCTGGGTTTGTGTATTTGACTATAATCTGGCAAATAGCCAGCGTTGTGTCGGTGTTGGAGGAGTCGTATGGGATTCAAGCCATGATGAAGAGCAAGGAATTGATAAAGGGGAAGATGGGATTGGCCACAGTGATATTCTTGATGCTCAACGTCACGTTTATCCTAATTCAGGTTTTGTTCAAGGCGGTGGTGGTGCACGGATGGAGGCTGGGCTCCGTCGACAGAACAGCTTATGCGATACTGTGTTTCTTGTTGCTGTCAGTGTTTTTCCTGTTTGGGCTGGTGATCCAAACGCACTGGAAAGGCGAGGTCAGGCTTGTGGAAACCCCCCCTCCCCCCTCATTCTTCATATTCATCTCTTTCCTTCTCTTCCATCCAGTTTTGAATTTCAATCCACCATGGTTAAGGATACTGAGTATTATGATATCCTTGGGGTTAGTCCCTCTGCTTCCGAGGTCGAAATTCGAAAGGCTTACTTCCACAAGCTTCTGGGCGAGGCTTATCAAATTTTAAGCGATCCAGTGCAGAGGAACGCATACAATCAAAATGGAAAGCATTCCGTGTCTAGGGAAGCTATGTTTGATCCAATGGCTGTGTTTGCCCTGCTTTTTGGAAGCGAATTATTTGAGGACTACGTAGGGCATCTAACTGCGGCATCAATGACTTCTTCTGAAATGGCCGATGAAAGTGAATATCCAGATAAAATACATGAAAAGTTCAAGGCAAGTATGTTTAACAATTCAGTCTATGCGTGTGTAACAGCTGTCCAGAGAGAAAGGGAAGAAAAACTAGCAAGTTTTTTAAAAGACTTTCTGGATCAATATGTCCGTGGTGATGAAAAGGGGTTCTTGCAGCGAGCAGAATCTGAGGCCAAACGACTTTCTAATGCAGCATTGGAATTAGGGAAAAAGGCCATTTATCTTGGAATGCCTTTTTTGGCTGAATGGGTTCGAAACAAAGGACATTTCTGGAAATCACAATTTACTGCTGCTAAAGGTGCATTTCGGTTGCTGCAGCTTCAAGAAGACATACACAAGCAATTTAAAATGGATGGCAGTGGCCCTGAAAATGATATCGAATCTCATATTCGCCTTAATAAGGATACACTTATGAATTCTCTATGGAAGTTGAATGTAGTAGACATAGAAGTGACCCTGGTACATGTCTGCCAAATGGTCTTAAGGGAAAATAGCGTTAAGAAAGAAGAGCTCAGAGCCCGTGCTAACGTTCTCAAGATTCTTGGGAAGTTATTTCAGGAAAAGAATTCAAAAGGAGAAGGAGCATCGAAGAAGAAAATTGCGGCAGATTCTGAGGATGAAGGAAGCAGTTCAGATTCTTCAGAGGATGATGAATCACCGAGAGTAGTTTCCTATCGAACGCCCTCTTTCACTCAGGCAATGTCATAA 1476 0.4356 MGTYYRNQRRRDRRPCDPGHIVLRWVCVFDYNLANSQRCVGVGGVVWDSSHDEEQGIDKGEDGIGHSDILDAQRHVYPNSGFVQGGGGARMEAGLRRQNSLCDTVFLVAVSVFPVWAGDPNALERRGQACGNPPSPLILHIHLFPSLPSSFEFQSTMVKDTEYYDILGVSPSASEVEIRKAYFHKLLGEAYQILSDPVQRNAYNQNGKHSVSREAMFDPMAVFALLFGSELFEDYVGHLTAASMTSSEMADESEYPDKIHEKFKASMFNNSVYACVTAVQREREEKLASFLKDFLDQYVRGDEKGFLQRAESEAKRLSNAALELGKKAIYLGMPFLAEWVRNKGHFWKSQFTAAKGAFRLLQLQEDIHKQFKMDGSGPENDIESHIRLNKDTLMNSLWKLNVVDIEVTLVHVCQMVLRENSVKKEELRARANVLKILGKLFQEKNSKGEGASKKKIAADSEDEGSSSDSSEDDESPRVVSYRTPSFTQAMS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0238 491 Gene3D DnaJ domain 149 222 IPR036869 -
Lele28g0238 491 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 119 466 - -
Lele28g0238 491 SUPERFAMILY Chaperone J-domain 156 237 IPR036869 -
Lele28g0238 491 MobiDBLite consensus disorder prediction 446 491 - -
Lele28g0238 491 SMART dnaj_3 161 199 IPR001623 -
Lele28g0238 491 Coils Coil 307 327 - -
Lele28g0238 491 Pfam X-domain of DnaJ-containing 323 455 IPR026894 -
Lele28g0238 491 CDD DnaJ 162 196 IPR001623 -
Lele28g0238 491 MobiDBLite consensus disorder prediction 446 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0238 Lele-ChrLele28 1401162 1405997 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0220 25 1305833 1312144 Lele28g0238 28 1401162 1405997 hybridization