Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0220 ATGGGCAGTTACCATCGGAATCAGAAACGGAGGGATTGCCGTCCTTGTGATCCTGGTCATATTGTTCTTCGCTGGGTTTGTGTATTTGACTATAATCTGGCAAATAGCCAGCGTTGTGTCGGTGTTGGAGGAGTCGTATGGGTTTCAGGCCATGATGAAGAGCAAGGAATTGATAAAGGGGAAGATGGGATTGGCCATAGTGATCTTCTTGATGCTCAACGTTACGTTTATCCTAATTCAGGTTTTGTTCAAGGTGGTGGTGGTGCACGGATGGAGGTTGAGCTCCGTCGACAGAACAGCTTATGCAATACTGTGCTTCTTGTTGTTGTCTGTGTTTTTCCTGTTCGGGCTGGTGATCCAAACGATACTACTGTGCATGTGTTCTCCTTCAAAGCTACCAATCCCTGGTACTTGAGGAATATACCCTTAACCATTCTCGCCAGTGGCCACCACCAGAAACTTGCTGTTATAAACTTTAGTGGCATTGGACAATACGTCCTTTGCAACGACCTTCCATGTCGCGTTGTTTTCAACAGTCATGGAGGCCGACTCCACGAGACGATTCCATTTTATATCGACGTGGAAACCCGAGACGTAATCGTCGAGGTAACGCATGAAAGCAACCCTGGGGACGAAGGTGGGCGTGTAGGGAGGAAAGGGCATGTATGGAAGGCTACAGAATTCTTTTCCCAGGATACTGAGTATTATGATATCCTTGGGGTTAGTCCCTCTGCTTCCGAGGCCGAAATTCGAAAGGCTTACTACCACAAGGTTTTGGGCGAGGCTTATCAAATTTTAAGCGATCCAGTGCAGAGGAACGCATACAATCAAAATGGAAAACATTTCGTGTCTAGGGAAGCTATGCTTGATCCCATGGCTGTCTTTGCTATGCTTTTTGGAAGTGAATTATTTGAGGACTACGTAGGGCATCTAACTGCAGCATCAATGACTTCTTCTGAAATGGCTGATGAAAGTGAATATCCAGATAAAATACATGAAAAGTTGAAGGCAAGTATGTTTAACAATTCAGCTGTCCAAAGAGAAAGGGAAGAAAAACTAGCGAGTTTTTTAAAAGACTTTGTGGGTCAATATGTCCGTGGTGATGAAAAGGGGTTCTTGCAGCGAGCAGAATCTGAAGCCAAACGACTTTCTAATGCAGATTTTGGACTTGATATGTTACACACCATCGGCTATATTTATTCAAGGCAGGCAGCACTAGAATTAGGGAAAAAAGCAATTTATCTTGGAGTGCCCTTTTTGGCTGAATGGGTTCGACATAGAGGACATTTCTGGAAATCGCAATTTACTGCCGCTAAAGGTGCATTTCAGCTGCTGCAGCTTCAAGAAAACATGCACAAACAATTTAAAATGGATGGTAGTGGCCCTGAAAATGATATTGAATCTCATATTCGCCTTAATAAGGATACACTGATGAATTCTTTATGGAAGTTGAATGTCGTAGACATAGAAGTGACCCTGGTACATGTCTGCCAAATGGTCCTAAGGGAAAATAACGTTAAAAAAGAAGAACTCAGAGCCCGTGCTAACGCTCTCAAGATTCTTGGGAAGTTATTTCAGGAAAAGAATTCAAAAGGAGGAGAAGCATCGAAGAAGAAAATTGCGGCAGATTCTGAGGATGAAGGAAGCAGTTCAGATTCTTCAGAGGATGATGAATCACCGAGAGCAGTTTCCTATCGAACGCCCTTTTTCACTCAGGGTATAGGTAGGCTGTTCAAATGCCTGTGTAATCCAGCATTTGATGTGGACGACGAAGAGATAGTTTACAGAAGCAAATGA 1797 0.4352 MGSYHRNQKRRDCRPCDPGHIVLRWVCVFDYNLANSQRCVGVGGVVWVSGHDEEQGIDKGEDGIGHSDLLDAQRYVYPNSGFVQGGGGARMEVELRRQNSLCNTVLLVVVCVFPVRAGDPNDTTVHVFSFKATNPWYLRNIPLTILASGHHQKLAVINFSGIGQYVLCNDLPCRVVFNSHGGRLHETIPFYIDVETRDVIVEVTHESNPGDEGGRVGRKGHVWKATEFFSQDTEYYDILGVSPSASEAEIRKAYYHKVLGEAYQILSDPVQRNAYNQNGKHFVSREAMLDPMAVFAMLFGSELFEDYVGHLTAASMTSSEMADESEYPDKIHEKLKASMFNNSAVQREREEKLASFLKDFVGQYVRGDEKGFLQRAESEAKRLSNADFGLDMLHTIGYIYSRQAALELGKKAIYLGVPFLAEWVRHRGHFWKSQFTAAKGAFQLLQLQENMHKQFKMDGSGPENDIESHIRLNKDTLMNSLWKLNVVDIEVTLVHVCQMVLRENNVKKEELRARANALKILGKLFQEKNSKGGEASKKKIAADSEDEGSSSDSSEDDESPRAVSYRTPFFTQGIGRLFKCLCNPAFDVDDEEIVYRSK 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0220 598 CDD DnaJ 234 268 IPR001623 -
Lele25g0220 598 SMART dnaj_3 233 271 IPR001623 -
Lele25g0220 598 MobiDBLite consensus disorder prediction 534 563 - -
Lele25g0220 598 SUPERFAMILY Chaperone J-domain 230 309 IPR036869 -
Lele25g0220 598 Gene3D DnaJ domain 218 260 IPR036869 -
Lele25g0220 598 Pfam X-domain of DnaJ-containing 346 540 IPR026894 -
Lele25g0220 598 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 223 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0220 Lele-ChrLele25 1305833 1312144 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0220 25 1305833 1312144 Lele27g1865 27 23429140 23432372 hybridization
Lele25g0220 25 1305833 1312144 Lele28g0238 28 1401162 1405997 hybridization