Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1770 ATGGGAGCTCTACGACGAACCTTTTTGACAGGATATCGGCAAACTTGGCGTCTTTTCACATTTCCAGTGTTGCATGCTGGAGCCATCCACCTTTTCATCAACATCTACATAAGGATTGGGATAATCTGTATACTGTCATCTCTCGTGGGTTCCTTGGTGGCTTTTCTTTTTATCCAAAACATTCCAGCTGTTGGTGCCTCCGGTGCTTTATATGGATTATTGGGATCCATGCTTTCAACGCTAATTTGGAACTGGAAATATTTCACCAATAAGATTGCAGTTAGTGCGCTGTTAGTCTCTCTGTTTGTGATCAATTTTGCTCTTGGCTTGCTGCCTTACGTAGACAATTTTTCAAGCATAGGGGGTTTTATATCTGGTTTTCTTCTTGGATCTACACTTTTAGTCAGCCCTCAGCTAGCTCCAAATAAAGCATGTCTCATTGATTACGGTCTCAAGAGTTACATCAAGCAAAAATTGAAGAAAAATCTGGACAGACCAATTATGAGAATTGTTTCTCTCGTTCTCCTTAGCCTAATAGTTGCGGGATGTGTTGTAGCAATTCATTTTGGTATAAACATCAGCGACTATTGCGAGTGGTGCCAATATGTTGACTGCACCATGGGGAACGATGAACAGATGACATTGACTTGCATGAGGAATGGCAACTTCAGGATCTTTCCTTGTACCAATATTTCTACTGCAAGAAAAAATGATATGTGCACTCTGATATGCTTTCACATTCCGTTGAGCCTTAGAGGAGCTTATCTGAGGCTAGTGTTATCCACCCTTGTACCTATCTCAGAAACAGCATCAACAAAAGAACGAAATTTTCTTGTACGCAGGCTCAATTTCCAGGTAATTAGAGCAATCTCAGGGTGTCGCAGAGAAGCGGTGGGACTTGAGGAAGAGAATCGAGCTTTAATGGAAACGAGAATTCAACCGCTCTCTCTGCGTTTCGACGAGAGGGTGGCGATCGAATCGAAGCTGAACGGATTCAACGGGTTCAGGGGAGTCCTATACGCAATGAGAAATGTGAGCTCGTTGCTGCTTACGATTCTGCTATACGGCTCGGTGTACTGCTGGCCGGAATCGTCCAATTTCGTACTGGGAGGATACAAAGGCTGCTTGTTCTTCGGATCGCCGTTCATGATCTCGACGGCGAGATTACAGCAGCGGGTAGCAGGGGAGATCGGCCAGATCGACGGGACGCCGGGAATTCTGTTATACGAGTTCAGGAGATCGAAGGTGGCGATGGAGGAGCTAAGAGGAGAATTAGGGAGGAGAGTATCTCAGGGGATGGTGGTGGAGTGGGAAACAGATATTGGAATAAGGGAGAGAGTGGAGAATTTGAGAGGGTGTTTTGGGATCCTGAGATCTGGAGCAGAGAACATTATCGGACAGCTCGACGATTTCTTTGACGAGATCGTTGAAGGCAGGAAGAAGCTTTTGGACTTTTGCAGTAATAGGAAGGCAAACATCGGAAAAGGAATAATGCAAAAGGAGGCGAAGGAATGTGAGATTCCTGGACTTGCTTTAACGTCAAAAGCATCTTCTTTTGCCCTTAGGAAGCTTTTGTCTGATTCGATTTCACTCTGA 1596 0.448 MGALRRTFLTGYRQTWRLFTFPVLHAGAIHLFINIYIRIGIICILSSLVGSLVAFLFIQNIPAVGASGALYGLLGSMLSTLIWNWKYFTNKIAVSALLVSLFVINFALGLLPYVDNFSSIGGFISGFLLGSTLLVSPQLAPNKACLIDYGLKSYIKQKLKKNLDRPIMRIVSLVLLSLIVAGCVVAIHFGINISDYCEWCQYVDCTMGNDEQMTLTCMRNGNFRIFPCTNISTARKNDMCTLICFHIPLSLRGAYLRLVLSTLVPISETASTKERNFLVRRLNFQVIRAISGCRREAVGLEEENRALMETRIQPLSLRFDERVAIESKLNGFNGFRGVLYAMRNVSSLLLTILLYGSVYCWPESSNFVLGGYKGCLFFGSPFMISTARLQQRVAGEIGQIDGTPGILLYEFRRSKVAMEELRGELGRRVSQGMVVEWETDIGIRERVENLRGCFGILRSGAENIIGQLDDFFDEIVEGRKKLLDFCSNRKANIGKGIMQKEAKECEIPGLALTSKASSFALRKLLSDSISL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1770 531 SUPERFAMILY Rhomboid-like 11 137 IPR035952 -
Lele27g1770 531 Gene3D - 3 135 IPR035952 -
Lele27g1770 531 PANTHER RHOMBOID-RELATED 1 206 IPR002610 GO:0004252|GO:0006508|GO:0016020
Lele27g1770 531 Pfam Rhomboid family 13 135 IPR022764 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1770 Lele-ChrLele27 22831237 22839410 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0316 25 1896241 1904528 Lele27g1770 27 22831237 22839410 hybridization
Lele26g0326 26 1954359 1955651 Lele27g1770 27 22831237 22839410 hybridization