Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1686 ATGGCGTCAATCTCGGGTATTTGCTCATCTACCCCATCTCTCAAACTCCAAAAGCAGTCTCCCAGCTTAATCAACATTCTCCGCAAAGAATTGGTAGCATTTCCTGCTCGTCCGAAACTGACTTCCAATGATCGGAGCTTGAGTCCTGTCGCCACACCATCCGTGGCTCGGGAGGCCCCGGCGGAATTATCCAATATCAACGATGGGGCCTTCTCGAAGGAGAAGGCAGGTTTGGAGAAAGATCCCCGTGCTCTCTGGCGGAGGTATGTTGACTGGCTGTACCAACACAAGGAGCTGGGGCTTTACCTCGATGTAAGTCGGGTTGGGTTCACGGACGAGTTCGTGAAGCGGATGGAGCCCCGTTTCCAAGCGGCATTCCGAGCGATGGTGGAACTGGAAAAGGGGTCGATTGCGAATCCCGATGAAGGCCGTATGGTCGGCCATTATTGGTTGAGGGACCCTAAACACGCGCCAAACCCGTTCCTCAAGACGCAGATTGAGAATTCTCTCGACGCCGTTTGCAGCTTCGCAAATGACATCGTCAGCGGTAAGATTAAGCCTCCATCGTCTCCGGAGGGTCGCTTTACCCAAATTCTCTCTGTTGGAATTGGAGGTTCTGCTCTTGGACCACAGTTTGTAGCAGAAGCATTGGCCCCTGATAATCCCCCTCTTAAGATAAGATTCATTGACAATACGGATCCTGCTGGAATTGATCATCAGATTGCACAACTTGGACCAGAATTAGCTTCAACACTTGTAATAGTGATTTCAAAGAGTGGAGGTACCCCTGAAACTAGAAACGGTTTACTAGAAGTACAGAAGGCCTTCCGTGAAGCGGGCTTGGATTTTCCAAAACAGGGTGTTGCAATAACACAAGAAAATTCTTTGTTAGATAATACTGCAAGAATTGAAGGGTGGTTGGCAAGATTTCCAATGTTTGACTGGGTGGGAGGTAGAACATCAGAAATGTCTGCAGTTGGCCTTCTTCCAGCTGCCCTTCAGGGGATTGATGTTAGAGAAATGCTTGCTGGCGCAGCTTTGATGGATGAGGCTAATAGAAGCACTGTGTTAAGGAATAATCCTGCAGCATTGCTAGCATTGTGTTGGTATTGGGCTACTGATGGAGTGGGATCCAAGGATATGGTTATTCTTCCATACAAGGACAGCCTGTTATTATTTAGCAGATACTTACAGCAGTTGGTCATGGAATCATTAGGCAAGGAGTTTGACTTGGACGGTAATCGGGTTAACCAAGGAATTTCTGTCTATGGAAATAAAGGAAGCACAGATCAGCATGCCTACATTCAACAACTGAGGGAAGGTGTGCACAATTTCTTTGTTACATTCATCGAGGTGCTACGTGATAGACCTCCTGGTCATGATTGGGAGCTTGAGCCTGGTGTGACATGTGGTGACTACTTGTTCGGCATGCTTCAGGGTACAAGGTCAGCTCTGTATGCTAATGACCGAGAGTCCGTCACAGTCACTGTGCAGGAAGTTACACCCAGATCAGCTGGTGCTCTTGTTGCACTCTATGAACGAGCTGTTGGGATATATGCCTCTCTTGTCAACATAAATGCATATCATCAACCTGGTGTGGAAGCTGGCAAAAAAGCAGCAGGTGAAGTATTAGCTCTTCAGAAGCGGGTCTTGGCAGTGCTAAATGAAGCAAGCTGCAAAGATCCTGTGGAGCCGTTAACACTTGAAGAAGTAGCTGACCGTTGTCACGCTCCAGAAGATATAGAAATGATTTACAAGATTATTGCTCATATGGCTGCCAACGACAGAGCGCTTATTGCTGAAGGCAGTTGTGGATCACCACGGAGCTTAAAGGTTTTTCTTGGGGAGTGTAATGTTGATGATTTGTATGCTTGA 1875 0.4741 MASISGICSSTPSLKLQKQSPSLINILRKELVAFPARPKLTSNDRSLSPVATPSVAREAPAELSNINDGAFSKEKAGLEKDPRALWRRYVDWLYQHKELGLYLDVSRVGFTDEFVKRMEPRFQAAFRAMVELEKGSIANPDEGRMVGHYWLRDPKHAPNPFLKTQIENSLDAVCSFANDIVSGKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQGIDVREMLAGAALMDEANRSTVLRNNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFVTFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANDRESVTVTVQEVTPRSAGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKDPVEPLTLEEVADRCHAPEDIEMIYKIIAHMAANDRALIAEGSCGSPRSLKVFLGECNVDDLYA 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1686 624 CDD SIS_PGI_2 379 543 IPR035482 -
Lele27g1686 624 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 59 553 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lele27g1686 624 Pfam Phosphoglucose isomerase 485 545 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lele27g1686 624 Pfam Phosphoglucose isomerase 132 454 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lele27g1686 624 Gene3D - 335 529 - -
Lele27g1686 624 SUPERFAMILY SIS domain 85 547 IPR046348 GO:0097367|GO:1901135
Lele27g1686 624 CDD SIS_PGI_1 167 333 IPR035476 -
Lele27g1686 624 ProSitePatterns Phosphoglucose isomerase signature 2. 520 537 IPR018189 GO:0004347|GO:0006094|GO:0006096
Lele27g1686 624 Hamap Glucose-6-phosphate isomerase [pgi]. 98 547 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lele27g1686 624 FunFam Glucose-6-phosphate isomerase 335 527 - -
Lele27g1686 624 FunFam Glucose-6-phosphate isomerase 150 333 - -
Lele27g1686 624 Gene3D - 148 334 - -
Lele27g1686 624 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 3 623 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lele27g1686 624 PRINTS Glucose-6-phosphate isomerase signature 520 533 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lele27g1686 624 PRINTS Glucose-6-phosphate isomerase signature 386 407 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lele27g1686 624 PRINTS Glucose-6-phosphate isomerase signature 506 520 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lele27g1686 624 PRINTS Glucose-6-phosphate isomerase signature 198 217 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lele27g1686 624 PRINTS Glucose-6-phosphate isomerase signature 488 506 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lele27g1686 624 PRINTS Glucose-6-phosphate isomerase signature 310 328 IPR001672 GO:0004347|GO:0006094|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1686 Lele-ChrLele27 22280065 22285258 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0401 25 2430369 2441937 Lele27g1686 27 22280065 22285258 hybridization
Lele26g0412 26 2520785 2527062 Lele27g1686 27 22280065 22285258 hybridization