Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0401 ATGGGACCGACACAAGAATTTGGCGGAAACAAGATTTTCCTAGTTGTAAGGGTCTCTCGTGTTGAAAAGGAAATGTCGAGGAAGAGATTGGACGAGTTAGATAAGCGCAGCCGAGATTGTTCCTTCCATTGCTTGCAAGTTCCTTTCAACCTACTTTTATTGGGCAATAATGAATCTGGGTCGATTCATGCCAAAAATAAAAAGGGTCGATTCAAGGCACAAATCCGCACATTCTCTAATTTTAATTCATTCCCATTCCGTTTGTTCTTGATTCTTCGAGCCCTCACAGGTGATCAGAAGGAAGTCCCATTCTCAAGTTCTACTTTGAGATCGCGAATTGATCCTGTCACTGGGTTAAAGACTGGAAGCAGCAGAGGGTTCGGCTTACCACCGCCTACTAAATTCAAAAGTGGACATCTTCTTTCAAATGCCATCCCAAGTGAAACAAATGATAGCGACCTTAGAAGCAAGGTCCCCAATGGCACAACTCAGATATACGGTAAACTCACACAACGGAAACCTCGATTCGCTAGTGACTATACATACTCTGAAGTCAGTTCTTCAAGGGAAACACTGGTTGGTAGACCCGTTGTTGTGAGGGACCCTCTCAGGAGAGTTAATGGGAATGTGAGGGAGACTGGTTTCACCGAGGATGAATCATTGGATTCTGCCGCTAGTTCTGAATTCTCCACCACTTACGTAGCAAGTGCCAATGGTTCATTCCAAAAGACTGAAGCTTATGTTTCAGAGGGGTATGCTTCTAGAGTGCCGCCAAGGATGTATGACAATGTGCTGCAGAAAAGGTTCAGACAATTCTCTTTTCCATCTTTCAATTTTGTGGTTGATGGCGGTTGTTCTGAATTGGATAACAGGCTACATTTTGTGGTCACAGCTATGATTAACAAAAATGCAGATGCACTTCAGGGAGATGGCGGGGTACCTGATCCCAGCTCTCTTCAGCCTGGAAAACCGGATCAGTCGGTGCATTCTTTTGGGGACCACACGTTCACTTCATGTGCTGCGGTTTCTCTCGATCGCCTGTCAGCTCAAATCCCTTTGATTTCATGTACTGCAGGAATTGGATGGACATCTTGGAAGAAAAGGTGGTTTATCTTAACCCGAACTTCATTGGTTTTCTTCAAAAGCGATCCAAATGCTGTTTCTCAGAAGGTAAATGAAGTAAATTTAACCCTTGGTGGCATTGACCTCAACAACTCAGGCAGTGTTGTGGTCAAAGCAGATAAGAAACTTTTGACTCTGCTTTTCCCTGATGGTCGTGATGGACGGGCTGTTACGCTTAAGGCTGAAACTATGGAGGATTTAAATGAGTGGAAGACTGCACTTGAGAATGCTTTGGCACAAGCACCGAGTGCTGCTAATGTGACAGGGCAAAATGGTGTCATCAAGAACGAGCAGACTGAATCAAAAGATACGCCATTGGACCAGTAAAGAGAACCAATGAGGTCTAAGGTCATTGGCCAGCCAATTTTACTTGCTCTGGAAGATGCTGATGGATCCCCAACTTTTCTGGAGAAGGGCCTCAGAATACTATTGATGATGCAAGCTGTAGCTTTACACAAAGCAGAGAACCGAATGAGCTCCTCAGCAGTAGCAGCTTGCATGGCACCGTTACTTCTTCGAGCTCTTTTTGTTGGGGAATGTGAGATTGAAAGTGATTTTGATGTGGGTGGTGATGGTTCTCTTCAACTTCTACAAGCAGCTGCTGCAGCTAACCATGCTCAAATCATTGTTATTACTTTATTGGACGAATATGAAAGCTTATTTGGGGAAGCTCGAGTGTCCCCAGATATGTACTATGAGTCAGATGAGAGTGAAACTGGGAGTGAGCGTTCTGATGTTGAGTCCTATGATGAAGACGACGACGACGATTATGATGATGATGAAGAACAAGGCGAATCAGTGGAGGAGTCTGATGCAGAGGAAGATGATGATCTTGGTAGTGAACCAAGCACTAAGAGTGGAAGCTCTAGGGAATATCACGACCATAAACATTCAAGTCCAAAATCCTCAGATAAGAGCGAAGGTCTTAAAGTCGGTCAGGTGGCATCCTCAGTTTCTCATGAAGATGTTAGAAACTCAGAAAATCTTGATATTCCAACTATCACTACTCGTGTAGAGCAGTCAAATAAGCCTTCTCGAGTACCTGAAGGTGTTTTCACAGATGAAAGTACAGTGCATCATCATACAAGTTCTATTAATTCTACAAATGCTTCCTGTATAAAAAAATCGGCAACAATGTCCAATAATCCAGCACGTGATCCTCGGCATGGTTCTAAATGGGGGCGTACCTCTTCCAAGTTATTACATCTTTCGGTATATCTCCAGGCAAGGAAGAATCTTTCTATGGAATCCATTGAATTTTCAGCTGACGATGATGCTGGAATTGGGACGTTTGAAGATGCCAAGACTGAATTGCAAAATAAATTTGCTGAAGATGTTAGAGAGAACAAAAAGCTGCAACATGATCAGCAAAATCAAAATAGGCCTTCGCACGAGTGCCATCTGGCTATTGAGAAAGATATGGCAAGCCTGCAGGAACAGTTGCCAGAGGAGAAGAATTCTTGTGCAACTCTTGAAGCAGGGCTGAAGTTACCTCCAGGAACCATTGTTGATGACAAGGCTAAGGCAGATTTGGAGGAGTTAGCTTTGTTAGAAGCAGATCTGGCCAGTTTAGAAAAGAAGGTCAATGATCTGAGAATGAAGCTTAATCTACCACATGAAACAAAGCTGACGAATAAGCCAGATACTGAAGTTATAACAGCCACGTCACAATTTGGCAAGTCAACAAGTAAGGAGAGTCAACTTGGAGCAGAAAATGACAATGAGAGAAAGCTGGGATCAACGTCCTTTCCAAGCAATCATCCACCGCAAAATAGTTCTAAGAGATTTGGAACAAAGAAAGAGGTTGCAAACCCACTGACAAAACTGTCGTTCAGACTAAATTTTATGAAGGATAAAGGGTCAGAAAAAGGAAAAGGATCAGAATTTAACCAACCCCTGCCGTCCCCCAATGCCTCTCGAGGATCTGAAGTTCATTCTGTATTAAACCCAGAAAAAGGAAGAGGCCTGGGCAGTTCTTTCCAGATGGCAGATAAAGGTTCAGGCAGAGAAGGTCCATCAGATAAAATGGGAAAATCAGGCGAACACTCGGAGAAATGGAGCCAGCATCCACAAACCTTAGATAGAGGCAAGTCAGAAAGCCAAAAGCCTTATAATGTGGATAAAGGACGTTGA 3255 0.4344 MGPTQEFGGNKIFLVVRVSRVEKEMSRKRLDELDKRSRDCSFHCLQVPFNLLLLGNNESGSIHAKNKKGRFKAQIRTFSNFNSFPFRLFLILRALTGDQKEVPFSSSTLRSRIDPVTGLKTGSSRGFGLPPPTKFKSGHLLSNAIPSETNDSDLRSKVPNGTTQIYGKLTQRKPRFASDYTYSEVSSSRETLVGRPVVVRDPLRRVNGNVRETGFTEDESLDSAASSEFSTTYVASANGSFQKTEAYVSEGYASRVPPRMYDNVLQKRFRQFSFPSFNFVVDGGCSELDNRLHFVVTAMINKNADALQGDGGVPDPSSLQPGKPDQSVHSFGDHTFTSCAAVSLDRLSAQIPLISCTAGIGWTSWKKRWFILTRTSLVFFKSDPNAVSQKVNEVNLTLGGIDLNNSGSVVVKADKKLLTLLFPDGRDGRAVTLKAETMEDLNEWKTALENALAQAPSAANVTGQNGVIKNEQTESKDTPLDQXREPMRSKVIGQPILLALEDADGSPTFLEKGLRILLMMQAVALHKAENRMSSSAVAACMAPLLLRALFVGECEIESDFDVGGDGSLQLLQAAAAANHAQIIVITLLDEYESLFGEARVSPDMYYESDESETGSERSDVESYDEDDDDDYDDDEEQGESVEESDAEEDDDLGSEPSTKSGSSREYHDHKHSSPKSSDKSEGLKVGQVASSVSHEDVRNSENLDIPTITTRVEQSNKPSRVPEGVFTDESTVHHHTSSINSTNASCIKKSATMSNNPARDPRHGSKWGRTSSKLLHLSVYLQARKNLSMESIEFSADDDAGIGTFEDAKTELQNKFAEDVRENKKLQHDQQNQNRPSHECHLAIEKDMASLQEQLPEEKNSCATLEAGLKLPPGTIVDDKAKADLEELALLEADLASLEKKVNDLRMKLNLPHETKLTNKPDTEVITATSQFGKSTSKESQLGAENDNERKLGSTSFPSNHPPQNSSKRFGTKKEVANPLTKLSFRLNFMKDKGSEKGKGSEFNQPLPSPNASRGSEVHSVLNPEKGRGLGSSFQMADKGSGREGPSDKMGKSGEHSEKWSQHPQTLDRGKSESQKPYNVDKGR 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0401 1084 Gene3D Rho GTPase activation protein 513 602 IPR008936 -
Lele25g0401 1084 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 350 515 - -
Lele25g0401 1084 MobiDBLite consensus disorder prediction 306 330 - -
Lele25g0401 1084 Gene3D - 352 454 IPR011993 -
Lele25g0401 1084 MobiDBLite consensus disorder prediction 661 678 - -
Lele25g0401 1084 SMART PH_update 341 455 IPR001849 -
Lele25g0401 1084 MobiDBLite consensus disorder prediction 921 972 - -
Lele25g0401 1084 MobiDBLite consensus disorder prediction 920 1084 - -
Lele25g0401 1084 MobiDBLite consensus disorder prediction 602 724 - -
Lele25g0401 1084 Pfam Leucine-zipper of ternary complex factor MIP1 837 910 IPR025757 -
Lele25g0401 1084 Coils Coil 881 908 - -
Lele25g0401 1084 MobiDBLite consensus disorder prediction 679 721 - -
Lele25g0401 1084 CDD PH 359 448 - -
Lele25g0401 1084 MobiDBLite consensus disorder prediction 603 618 - -
Lele25g0401 1084 ProSiteProfiles PH domain profile. 364 453 IPR001849 -
Lele25g0401 1084 Coils Coil 434 454 - -
Lele25g0401 1084 MobiDBLite consensus disorder prediction 1042 1084 - -
Lele25g0401 1084 MobiDBLite consensus disorder prediction 1002 1018 - -
Lele25g0401 1084 Pfam PH domain 364 452 IPR001849 -
Lele25g0401 1084 MobiDBLite consensus disorder prediction 619 652 - -
Lele25g0401 1084 Coils Coil 809 829 - -
Lele25g0401 1084 SUPERFAMILY PH domain-like 361 460 - -
Lele25g0401 1084 SUPERFAMILY GTPase activation domain, GAP 516 597 IPR008936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0401 Lele-ChrLele25 2430369 2441937 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0401 25 2430369 2441937 Lele27g1686 27 22280065 22285258 hybridization
Lele25g0401 25 2430369 2441937 Lele28g0410 28 2528784 2536389 hybridization