Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1563 ATGGACTACTACTGCGTCAGTGAGATAGAAGGAAAGCAAGCTCATGACCCTTTATTCGCTCACAAAATGAGCAATAAATCGTCGTCTTCCCAGCGACGTTGCGTTTGGGTTCCTGGCCCTGTAATTGTAGGAGCCGGCCCTTCCGGGCTCGCTGTAGCTGCTTGTCTCAAGGAGAAAGGCGTCCCCAGCGTACTTCTAGAAAGGTCTAATTGCATAGCTTCTCTCTGGCAGCTCAAGACCTATGATCGTCTTCGCCTTCATTTACCCAAGCAGTTCTGCGAGCTCCCTCTCATGGGCTTCCCCACCTATTTCCCCACATATCCGACCAAGCAACAGTTCATTGACTACTTAGTGAGCTATGCCGAGAGGTTCGATATTAGGCCGAGGTTCAATGAGACGGTGAAGGAAGCGGAATTCGACTCGACGCTCGGGTTCTGGCGCGTGAGCAGTGAGCGGAAGGCGGAGACGACGACGTCGACGGAGTATGTGTGCCGGTGGCTGATTGTGGCGACGGGAGAGAATGCGGAGGCGGTGGTGCCGGAGATAGAAGGAGCGGAGGAGTTCGGAGGGCCGATAAAGCACACGAGCTTGTACAAGAGCGGCGACGAGTTGAGAGGGAAGAAGGTTTTGGTGGTTGGGTGTGGGAATTCGGGCATGGAAGTGTGCTTAGATCTTTGCAACCATAATGCTAGCCCTTCTCTTGTGGTCAGAGACACAGTGCACGTCCTACCACGAGAGATGCTGGGAAAATCAACTTTCGGGCTGTCCATGTGGTTGCTCAAGTGGCTTCCCATACGACTCGTGGATCGCTTCCTGCTCATCGTGTCATGGCTTTTGCTCGGCGACACCGCTCGCTTCGGATTGGTTCGTCCTCGTTTGGGTCCCCTTCAGCTCAAGAACCTTTCCGGCAAGACCCCAGTCCTCGATGTTGGTACCCTCTCCAAGATCAAAAGCGGACACGTTCAGGTTTGTCCGGGCGTTAAGCGGCTAAAACTTCACACTGTGGAATTCGTTGATGGAACATCACAGAATTTCGATGCCATCATATTTGCAACAGGTTACAAAAGCAATGTACCCTCTTGGCTAAAGGAAGGAGATATGTTCTGTGAGGAAGATGGGTTCCCAAGAAGGCCATTCCCTGATGGGTGGAAGGGAGAAAATGGGATGTACGCCGTGGGTTTTACCAAACGAGGACTTCTTGGTGCCTCCATGGATGCAAAGAGAATAGCTCAAGATATTGAACAGTGTGGGAAAGCTGAGGCAAAGCACAGTACTGCTTTCACTCGCTCACTTTTGCAGCAATCTTATTCATGA 1314 0.519 MDYYCVSEIEGKQAHDPLFAHKMSNKSSSSQRRCVWVPGPVIVGAGPSGLAVAACLKEKGVPSVLLERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPTYFPTYPTKQQFIDYLVSYAERFDIRPRFNETVKEAEFDSTLGFWRVSSERKAETTTSTEYVCRWLIVATGENAEAVVPEIEGAEEFGGPIKHTSLYKSGDELRGKKVLVVGCGNSGMEVCLDLCNHNASPSLVVRDTVHVLPREMLGKSTFGLSMWLLKWLPIRLVDRFLLIVSWLLLGDTARFGLVRPRLGPLQLKNLSGKTPVLDVGTLSKIKSGHVQVCPGVKRLKLHTVEFVDGTSQNFDAIIFATGYKSNVPSWLKEGDMFCEEDGFPRRPFPDGWKGENGMYAVGFTKRGLLGASMDAKRIAQDIEQCGKAEAKHSTAFTRSLLQQSYS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1563 437 Pfam Flavin-binding monooxygenase-like 42 359 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lele27g1563 437 Gene3D - 40 422 IPR036188 -
Lele27g1563 437 SUPERFAMILY FAD/NAD(P)-binding domain 206 417 IPR036188 -
Lele27g1563 437 SUPERFAMILY FAD/NAD(P)-binding domain 41 246 IPR036188 -
Lele27g1563 437 PRINTS Pyridine nucleotide disulphide reductase class-II signature 204 228 - -
Lele27g1563 437 PRINTS Pyridine nucleotide disulphide reductase class-II signature 39 61 - -
Lele27g1563 437 FunFam Flavin-containing monooxygenase 40 422 - -
Lele27g1563 437 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 41 422 - -
Lele27g1563 437 PRINTS FAD-dependent pyridine nucleotide reductase signature 208 226 - -
Lele27g1563 437 PRINTS FAD-dependent pyridine nucleotide reductase signature 164 182 - -
Lele27g1563 437 PRINTS FAD-dependent pyridine nucleotide reductase signature 40 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1563 Lele-ChrLele27 21458478 21461053 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0515 25 3247371 3249979 Lele27g1563 27 21458478 21461053 hybridization
Lele26g0532 26 3377438 3379947 Lele27g1563 27 21458478 21461053 hybridization