Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0515 ATGGACTACTACTGCGTCAGAGAGATAGAAGGAAAGCAAGCTCATGACCCTTTATTCGCTCACAAAATGAGCAATAAATCGTCGTCTTCCCAGCGACGTTGCGTTTGGATCCCTGGCCCTGTAATTGTAGGAGCCGGCCCTTCCGGCCTCGCTGTAGCGGCTTGTCTCAAGGAGAAAGGCGTCCCCAGCGTACTCCTAGAAAGATCTAATTGTATAGCTTCTCTCTGGCAGCTCAAGACCTATGATCGTCTTCGCCTTCATTTACCCAAGAAGTTCTGCGAGCTCCCTCTCATGGGCTTCCCCACCGATTTCCCCACATATCCGACCAAACAACAGTTCATTGACTACTTAGTGAGCTATGCCGAGAGGTTCGATATTAGGCCGAGGTTCAATGAGACGGTGAAGGAAGCCGAATTCGACTCGACGCTCGGGTTCTGGCGCGTAAGGAGTGAGGGGAAGGAGGAGACGTCGACGGAGTATGTGTGCCGGTGGCTGATTGTGGCGACGGGAGAGAATGCGGAGGCGGTGGTGCCGGAGATAGAAGGAGCGGAGGAGTTCGGAGGGCCGATAAAGCACACGAGCTTGTACAAGAGCGGCGACGAGTTGAGACGGAAGAAGGTTTTGGTTGTTGGGTGTGGGAATTCGGGCATGGAAGTGTGCCTAGATCTTTGCAACTATAATGCTAGCCCTTCTCTTGTGGTCAGAGACACAGTGCACGTCCTACCACGAGAGATGCTGGGAAAATCAACTTTCGGGCTGTCCATGTGGTTGCTCAAGTGGCTTCCCTTACGACTCGTGGATCGCTTCCTGCTCATCGTGTCATGGCTTTTGCTCGGCGACACCGCTCGCTTCGGATTGGTTCGTCCTCGTTTGGGTCCCCTTCAGCTCAAGAACCTTTCCGGCAAGACCCCAGTCCTCGATGTTGGTACCCTCTCCAAGATCAAAAGCGGACACATTCAGGTTTGTCCGGGCGTTAAGCGGCTAAAACGTCACACTGTGGAATTCGTTGATGGAACATCACAGAATTTCGATGCCATCATATTTGCAACAGGTTACAAAAGCAATGTACCCTCTTGGCTAAAGGAAGGAGATATGTTCTGTGAGGAAGATGGGTTCCCAAGAAGGCCATTCCCTGATGGGTGGAAGGGAGAAAATGGGATGTACGCCGTGGGTTTTACCAAACGAGGACTTCTTGGTGCCTCCTTGGATGCAAAGAGAATAGCTCAAGATATTGAACAGCGTTGGAAAGCTGAGGCAAAGCACAGTACTGCTTTGACTCGCTCACTTTTGCAGCAATCTTATTCATGA 1308 0.5153 MDYYCVREIEGKQAHDPLFAHKMSNKSSSSQRRCVWIPGPVIVGAGPSGLAVAACLKEKGVPSVLLERSNCIASLWQLKTYDRLRLHLPKKFCELPLMGFPTDFPTYPTKQQFIDYLVSYAERFDIRPRFNETVKEAEFDSTLGFWRVRSEGKEETSTEYVCRWLIVATGENAEAVVPEIEGAEEFGGPIKHTSLYKSGDELRRKKVLVVGCGNSGMEVCLDLCNYNASPSLVVRDTVHVLPREMLGKSTFGLSMWLLKWLPLRLVDRFLLIVSWLLLGDTARFGLVRPRLGPLQLKNLSGKTPVLDVGTLSKIKSGHIQVCPGVKRLKRHTVEFVDGTSQNFDAIIFATGYKSNVPSWLKEGDMFCEEDGFPRRPFPDGWKGENGMYAVGFTKRGLLGASLDAKRIAQDIEQRWKAEAKHSTALTRSLLQQSYS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0515 435 FunFam Flavin-containing monooxygenase 40 420 - -
Lele25g0515 435 SUPERFAMILY FAD/NAD(P)-binding domain 41 241 IPR036188 -
Lele25g0515 435 PRINTS Pyridine nucleotide disulphide reductase class-II signature 202 226 - -
Lele25g0515 435 PRINTS Pyridine nucleotide disulphide reductase class-II signature 39 61 - -
Lele25g0515 435 PRINTS FAD-dependent pyridine nucleotide reductase signature 40 59 - -
Lele25g0515 435 PRINTS FAD-dependent pyridine nucleotide reductase signature 162 180 - -
Lele25g0515 435 PRINTS FAD-dependent pyridine nucleotide reductase signature 206 224 - -
Lele25g0515 435 SUPERFAMILY FAD/NAD(P)-binding domain 204 416 IPR036188 -
Lele25g0515 435 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 41 422 - -
Lele25g0515 435 Gene3D - 40 420 IPR036188 -
Lele25g0515 435 Pfam Flavin-binding monooxygenase-like 42 357 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0515 Lele-ChrLele25 3247371 3249979 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0515 25 3247371 3249979 Lele27g1563 27 21458478 21461053 hybridization
Lele25g0515 25 3247371 3249979 Lele28g0524 28 3334405 3336905 hybridization