Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1263 ATGGCGAATCTCAAAGACGCAAATTTTACTAAGAACGAAGGAGGTTCGATTTCCTTCCCCGATTTCCCTGAAGATGTTCAGCTTTGTATCCTCTCCTTCCTCACACCATCTGAAATTGTCGCCTTTGCATGCACATCGAAGCGATTCGGCTCCCTCTGTAGCAACGATAGCAAACTCTGGTTTAGCCTGTGCGACAGGAAGTGGGGTTCGAAGACACAGATCGCGAAATGGGGCAATGGGAAAATTAGCTACCGCCTTCTGTACAAAACCCTCGACGAATGGGAGAATCTAATTGGCTTTTGGCGTCGAAGCGGACCGGGAAGCATCGCTATTGCATCACCGTCGCTGGTTATCTTCGAGTGGGGCCAATCGTTCCTCGCCGGTTCCAGAGTTTCTCCGTCGAAATCTGGGACCTACGATATATTAAAGTCTCCATTTGTGCGGATGGGTCTATCGTCGGAAGGACAGATTGTGAATTTTCTCGATCCCGATGGGCAAACTGAAATGTTCGGTAAATTTGAGATTTCTGAGCAATTTGACATGCCTGGGAATGATCTGATTCCGGTCAATGTTAGTTTTATGGGGAAAACACACTTTGTTGTGGAGGAAAATCAAAACTTTATCCATTTCAATGGTCCAGACCAAAGGAAACATGGATTAAGGAGAAGTTCCAGTAGCACGATTCTGAGTTCAGAAGATTGCAATGTTGGAGAAGATGTGATTGGTGTCGAAAGTGGATCACCTGGAAGCTTACCAGACAGATTGATGTCAGACATTTATCAGCATTTTGCAAACAGGACAAGCCCAGGTAGTGATATATCGAGGAAACAAAGGAGAAGAGAGAAGGAAAGGCTAGCCAGAAGAAAATGGGAGCCTGAGCATTACGTGAAGATTGTTAATTGTGCACCCACTCCATCACGCCCATTGCAAGGCCTATGGAAGGGCATTGATGATAACATGAGTTTAGCATTTTATCTTGTGGTGTATGATGACATCGGGGGTGTTGCTTGTCGGCAAGTTGGGAATCCTCCGGAGCGATTTCCCGGTCATTCCCCGGTCTTCTGGGCAACAAATGCTACATTTCTAGAATCACCTTTCTCCCCTGAGGAGGAGTATTTATATGACACTCGCATTCATCTCAGACCACTTGAAGCAGCCGGTGAGATTCACCAGCACTGCCTTTTGACAGAAAATGAAGGGGTAAATGCAATTCTCCACATAAACTCAAGCTATGAGTTGATTATTCCAGACCTTGCTGGAACAATGAATCCTAGGAGTGCAGAAGGAAGGATTTGGCAGTACCAGAATGGTACTTTTGGATTCGGCTTCCTTCGGGACAATTTTATAGTAGACCTGAAGCGTATTGCGTATGATGACTGTATCTAG 1386 0.456 MANLKDANFTKNEGGSISFPDFPEDVQLCILSFLTPSEIVAFACTSKRFGSLCSNDSKLWFSLCDRKWGSKTQIAKWGNGKISYRLLYKTLDEWENLIGFWRRSGPGSIAIASPSLVIFEWGQSFLAGSRVSPSKSGTYDILKSPFVRMGLSSEGQIVNFLDPDGQTEMFGKFEISEQFDMPGNDLIPVNVSFMGKTHFVVEENQNFIHFNGPDQRKHGLRRSSSSTILSSEDCNVGEDVIGVESGSPGSLPDRLMSDIYQHFANRTSPGSDISRKQRRREKERLARRKWEPEHYVKIVNCAPTPSRPLQGLWKGIDDNMSLAFYLVVYDDIGGVACRQVGNPPERFPGHSPVFWATNATFLESPFSPEEEYLYDTRIHLRPLEAAGEIHQHCLLTENEGVNAILHINSSYELIIPDLAGTMNPRSAEGRIWQYQNGTFGFGFLRDNFIVDLKRIAYDDCI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1263 461 MobiDBLite consensus disorder prediction 265 286 - -
Lele27g1263 461 Gene3D - 11 98 - -
Lele27g1263 461 Pfam F-box domain 20 57 IPR001810 GO:0005515
Lele27g1263 461 MobiDBLite consensus disorder prediction 272 286 - -
Lele27g1263 461 PANTHER F-BOX ONLY PROTEIN 48-RELATED 3 304 IPR045118 GO:0019005|GO:0031146
Lele27g1263 461 SMART fbox_2 22 62 IPR001810 GO:0005515
Lele27g1263 461 SUPERFAMILY F-box domain 9 92 IPR036047 GO:0005515
Lele27g1263 461 ProSiteProfiles F-box domain profile. 16 63 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1263 Lele-ChrLele27 19439751 19441410 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0815 25 5252010 5253667 Lele27g1263 27 19439751 19441410 hybridization
Lele26g0827 26 5311914 5313349 Lele27g1263 27 19439751 19441410 hybridization