Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0961 ATGAAAAATCTGAAGTCAACTCCATCGGCGCCGCCATCGTCGTCATCTTCTCCAAGCATGAAGATCGGGATTGTGGGATTTGGCCCCTTCGCGCAATTTCTGGCGAACACATTTATCAGACAAGGCCACACTCTTCGTGCTACTTCTCGCTCTGATTATTCTCCACTCTGTTCCGAATTAGGCATCGATTTCTTCAGGGATTTAACCGCCTTCCTTGAAGCCGACAACGACGTCGTACTCATCAGCACATCCATTATTTCCCTACCAGAGGTTCTAAGACTTATGCCACTGGATCGACTCAAGAGACCTGTGCTCTTTGTTGATGTACTTTCAGTCAAAGAGTACCCAAGAAAACTTCTATTACAAGTTTTGCCGGAGGAATCGGATATCCTCTGCACGCACCCAATGTTTGGAGCAGTTAGTGGCAAGGATGGGTGGAGAGATCTCAATTTCATGTATGAAAAAGTTCGAATCAGAAATGAAGATACCTGTTCCAATTTCCTCCAAATTTTTGCAAGCGAAGGTTGCAGAATGCTGGAAATGTCCTGTAAGGAACATGATAGATTTGCAGCCAGGAGCCAATTCATCACACATGCCATAGGCAGGGCATTGGGAGAGATGGAAATCACGTCCACACCTATCGACACCAAGGGCTTTCAGACACTTGTTCAAACGAAGGACACCGTCATGAGCAGTAGTTTTGACCTCTTCACTGGATTGTTCACGCATAACAGATTTGCCAGACAGGAGCTGGAAAACCTTGAAAACGCCTTGCACAAAGTCAAGGAGATGCTGATTCAAAAGGCGAATGAGGAGCAAGAAAATACTGAATGTTGA 837 0.4552 MKNLKSTPSAPPSSSSSPSMKIGIVGFGPFAQFLANTFIRQGHTLRATSRSDYSPLCSELGIDFFRDLTAFLEADNDVVLISTSIISLPEVLRLMPLDRLKRPVLFVDVLSVKEYPRKLLLQVLPEESDILCTHPMFGAVSGKDGWRDLNFMYEKVRIRNEDTCSNFLQIFASEGCRMLEMSCKEHDRFAARSQFITHAIGRALGEMEITSTPIDTKGFQTLVQTKDTVMSSSFDLFTGLFTHNRFARQELENLENALHKVKEMLIQKANEEQENTEC 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0961 278 Coils Coil 244 278 - -
Lele27g0961 278 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 181 IPR036291 -
Lele27g0961 278 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 20 278 IPR003099 GO:0004665|GO:0006571|GO:0008977
Lele27g0961 278 Pfam Prephenate dehydrogenase, nucleotide-binding domain 59 146 IPR046826 GO:0070403
Lele27g0961 278 Gene3D - 8 187 - -
Lele27g0961 278 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 182 269 IPR008927 -
Lele27g0961 278 PANTHER AROGENATE DEHYDROGENASE-RELATED 13 273 IPR045011 GO:0006571|GO:0033730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0961 Lele-ChrLele27 17452702 17455603 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0961 27 17452702 17455603 Lele27g0961 27 17452702 17455603 ECH
Lele25g1117 25 7209032 7212227 Lele27g0961 27 17452702 17455603 hybridization