Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1117 ATGACAAATTCAACTTCATCGTCGCCGTCATCTTCTCCAAGCATGAAGATCGGGATTGTGGGATTTGGCCCCTTCGCGCAATTTCTGGCGAACACATTTATCAGACAAGGCCACACTCTTCGTGCGACTTCTCGCTCTGATTATTCCCCACTGTGTTCCGAATTAGGCATCGATTTCTTCAGGGATGTAACTGCCTTCCTTGAAGCGGACAACGATGTCGTACTCATCAGCACATCCATTATTTCCCTCCCAGAGGTTCTCAGATCTATGCCACTCGATCGACTCAAGAGACCTGTGCTCTTTGTTGATGTCCTTTCAGTCAAAGAGTACCCAAGAAAACTTCTATTACAAGTTTTGCCGGAGGAATCGGATATCCTCTGCACGCACCCAATGTTTGGAGCAATTAGTGGCAAGGATGGGTGGAGAGATCTCAATTTCATGTATGAAAAAGTTCGAATCAGAAATGAAGATACCTGCTCCAATTTCCTCCAAATTTTTGCAAGCGAAGGTTGCAGAATGCTGGAAATGTCCTGTGAGGAACATGATAGATTTGCAGCCAGGAGCCAATTCATCACACATGCCATAGGCAGGGCATTGGGAGAGATGGAAATCACGTCCACACCTATCGACACCAAGGGCTTTCAGACACTTGTTCAAACGAAGGACAACGTCATGAGCAGTAGTTTTGACCTCTTCACTGGATTGTTCACGCATAACAGATTTGCCAGACAGGAGCTGGAAAACCTTGAAAACGCCTTGCACAAAGTCAAGGAGATGCTGATTCAAAAGGCGAATGAGGAGCAAGAAAATACTGAATGTTGA 822 0.4562 MTNSTSSSPSSSPSMKIGIVGFGPFAQFLANTFIRQGHTLRATSRSDYSPLCSELGIDFFRDVTAFLEADNDVVLISTSIISLPEVLRSMPLDRLKRPVLFVDVLSVKEYPRKLLLQVLPEESDILCTHPMFGAISGKDGWRDLNFMYEKVRIRNEDTCSNFLQIFASEGCRMLEMSCEEHDRFAARSQFITHAIGRALGEMEITSTPIDTKGFQTLVQTKDNVMSSSFDLFTGLFTHNRFARQELENLENALHKVKEMLIQKANEEQENTEC 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1117 273 Pfam Prephenate dehydrogenase, nucleotide-binding domain 54 140 IPR046826 GO:0070403
Lele25g1117 273 Coils Coil 239 269 - -
Lele25g1117 273 Gene3D - 2 182 - -
Lele25g1117 273 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 176 IPR036291 -
Lele25g1117 273 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 177 264 IPR008927 -
Lele25g1117 273 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 15 273 IPR003099 GO:0004665|GO:0006571|GO:0008977
Lele25g1117 273 PANTHER AROGENATE DEHYDROGENASE-RELATED 6 268 IPR045011 GO:0006571|GO:0033730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1117 Lele-ChrLele25 7209032 7212227 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1117 25 7209032 7212227 Lele25g1117 25 7209032 7212227 ECH
Lele25g1117 25 7209032 7212227 Lele27g0961 27 17452702 17455603 hybridization