Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0960 ATGTCGAGGATTTACGATGCGACGGTTATCGGAGAACCATTGGCGATTGGGAAAGATAAATGGAAAGTGTGGGAGAAGTTGATGAATGCTCGAGTAGTGTATTTGGGGGAAGCGGAACAGGTTCCCGTTCGAGACGATAAGGAAGTGGAGCTTGAAGTAGTGAAGAATTTGCACAAACGATGTATCGGGAGCGAGAAACGATTATCATTGGCCCTTGAAGCATTTCCGTCTGATCTGCAGGAGCAGCTCAATCAGTATATCGATAAAAAGATAGATGGAGAAACTTTAAAGTCCTATACATTACATTGGCCACCTCAAAGGTGGCAGGAGTATGAACCTCTTTTTAGCTACTGTCATGATAATGAAATTCGTCTCATTGCTTGTGGTACCCCACTAAAGGTCTTAAGGACTGTGCAAGCAGAAGGAGTTCGTGGGCTTTCAAGGGCTGATTGTAAACTTTATGTTCCTCCAGCTGGTTCAGGCTTCATATCAGGCTTTACTTCGATCTCACGCAGATCATCAGGAGATATGACTAATCCAAATCCGTCTATTCCTTTCTCATATCTATCTGCACAGGCTAGAGTAGTTGAAGATTACACTATGTCTCGCATCATCTTACAAAATGTTCAGGAGGAAGGAGCTGGTGGTATGTTAGTGGTTGTGACTGGTGCAAGCCACGTTACTTATGGATCTAGAGGAACTGGAGTGCCAGCAAGAATTTCAAGGAAAATGCAGAAGAAAAATCAAGTAGTTATATTGCTTGATCCCGAAAGGCAACTCATTCGTAGAGAGGGAGAAGTTCCCATTGCTGATTTCTTGTGGTATTCTGCTGCCAGACCATGTAGTAGAAACTGCTTTGATCGTGCTGAGGTTGCACGGGTTATGAATGCTGCTGGTCGGAGGAGGGATGCCCTCCCACAGGATCTTCAAAAGGGCATTGATCTTGGTTTGGTATCACCTGAGGTGTTACAGAACTTTTTCGATCTAGAGCAGTATCCACTGATTTCAGAACTCACTCATCGATTCCAGGGATTTAGGGAACGATTATTGGCGGATCCGAAATTTTTGCATAGATTAGCCATAGAGGAAGCCATATCAATAACAGCTACACTAATAGCACAGTATGAGAAGCGAAAGGAAAATTTTTTTGAAGAGCTTGACTATGTTATAACAGATGCAGTCAGAGGAGCAGTTGTTGATTTCTTCACAGTGTGGCTTCCTGCCCCGACTTTGTCATTCCTTTCATATGCTAATGATATGAATTCACCTGACAACATTGATGCTTTGAGAGGTCTTTTGGGCTCCATCCCAGACAATGCATTTCAGAAAAGTCCTGTGGGGACAAACTGGAATCTCAATAATAGAGTTGCATCTGTTTTATTTGGTGGTTTGAAGCTTGCTAGTGTTGGGTTTATCTCAAGTATAGGAGTTGTGGCTTCATCAAATGCATTGTTTGCAATTCGTAGATTCTTTGATCCAGCAGTTATTTCTAATCAACGGGTTATAAGATCACCAATACTCAAAACAGCAGTTGTTTATTCATGTTTTCTTGGGATATCTGCAAATCTTCGTTATCAGATTATAGCTGGAGTTGTGGAGCACCGGCTTTCCGAACAATTTTCATCCCAAACACTTCTTGTTAATATGATATCCTTTGTTGCTCGGACAGTCAATTCTTATTGGGGAAATCAGCAATGGATTGACATTGCCCGGTCTACTGGACTGCAAGTTAAAAAGACCGAATCATCCTCCCTACAAGTACCAGATTCTCCCAATCAAGCTTCAATTGTGTGCAACGAAACAGAAGAAACTGGCGTTGACGATATCCAAAGTAAATGA 1839 0.422 MSRIYDATVIGEPLAIGKDKWKVWEKLMNARVVYLGEAEQVPVRDDKEVELEVVKNLHKRCIGSEKRLSLALEAFPSDLQEQLNQYIDKKIDGETLKSYTLHWPPQRWQEYEPLFSYCHDNEIRLIACGTPLKVLRTVQAEGVRGLSRADCKLYVPPAGSGFISGFTSISRRSSGDMTNPNPSIPFSYLSAQARVVEDYTMSRIILQNVQEEGAGGMLVVVTGASHVTYGSRGTGVPARISRKMQKKNQVVILLDPERQLIRREGEVPIADFLWYSAARPCSRNCFDRAEVARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHRFQGFRERLLADPKFLHRLAIEEAISITATLIAQYEKRKENFFEELDYVITDAVRGAVVDFFTVWLPAPTLSFLSYANDMNSPDNIDALRGLLGSIPDNAFQKSPVGTNWNLNNRVASVLFGGLKLASVGFISSIGVVASSNALFAIRRFFDPAVISNQRVIRSPILKTAVVYSCFLGISANLRYQIIAGVVEHRLSEQFSSQTLLVNMISFVARTVNSYWGNQQWIDIARSTGLQVKKTESSSLQVPDSPNQASIVCNETEETGVDDIQSK 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0960 612 Pfam Haem-binding uptake, Tiki superfamily, ChaN 23 240 IPR007314 -
Lele27g0960 612 Pfam Protein RETICULATA-related 347 531 IPR021825 -
Lele27g0960 612 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 1 609 - -
Lele27g0960 612 SUPERFAMILY EreA/ChaN-like 22 276 - -
Lele27g0960 612 CDD ChanN-like 31 251 IPR007314 -
Lele27g0960 612 Gene3D - 18 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0960 Lele-ChrLele27 17445559 17451355 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0960 27 17445559 17451355 Lele27g0960 27 17445559 17451355 ECH
Lele25g1118 25 7213243 7218528 Lele27g0960 27 17445559 17451355 hybridization