Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1118 ATGATTTACGATGCGACGGTTATCGGAGAACCATCGGCGATTGGGAAAGATAAATGGAAAGTGTGGGAGAAGTTGATGAATGCTCGAGTAGTGTATTTGGGGGAAGCGGAACAGGTTCCCGTTAGAGACGATAAGGAAGTGGAGCTTGAAGTAGTGAAGAATTTGCACAAACGATGTATCGGGAGCGAGAAACGATTATCATTGGCCCTTGAAGCATTTCCGTCTGATCTTCAGGAGCAGCTCAATCAGTATATCGATAAAAAAATAGATGGAGAAACTTTGAAGTCTTATACATCACATTGGCCACCTCAAAGGTGGCAGGAGTATGAACCTCTTTTTAGCTACTGTCATGATAATGAAATTCGTCTCATTGCTTGTGGAACCCCACTAAAGGTCTTAAGGACTGTGCAAGCAGAAGGGGTTCGTGGGCTTTCAAGGGCTGATTGTAAACTTTATGTTCCTCCAGCTGGTTCAGGCTTCATAGCAGGCTTTAATTCAATCTCACGCAGATCATCAGGAGATATGACTAATCGAAATTCGTCTATTCCTTTCTCGTATCTATCTGCACAGGCTAGAGTAGTTGAAGATTACACTATGTCTCGCATCATCTTACAAAATGTTCAGGAGGAAGGAGCTGGTGGTATGTTAGTGGTTGTGACTGGTGCAAGCCACATTACTTATGGATCTAGAGGAACTGGAGTGCCAGCAAGAATTTCAAGGAAAATGCAGAAGAAAAATCAAGTCGTTATATTGCTTGATCCCGAAAGGCAACTCATTCGTAGAGAGGGAGAAGTTCCCATTGCTGATTTCTTGTGGTATTCTGCTGCCACACCATGTAGTAGAAACTGCTTTGATCGTGCTGAGGTTGCACGGGTTATGAATGCTGCTGGTCGGAGGAGGGATGCCCTCCCACAGGATCTTCAAAAGGGCATTGATCTTGGTTTGGTATCACCTGAGGTGTTACAGAACTTTTTCGATCTGGAGCAGTATCCACTGATTTCAGAACTCACTCATCGATTCCAGGGATTTAGGGAACGATTATTGGCTGATCCGAAATTTTTGCATAGATTAGCCATAGAAGAAGCCATATCAATAACAGCTACACTAATAGCACAGTATGAGAAGCGAAAGGAAAACTTTTTTGAAGAGCTTGACTATGTTATAACAGATGCAGTCAGAGGATCAGTTGTTGATTTCTTCACAGTGTGGCTTCCTGCCCCGACTTTGTCATTCCTTTCATATGCTGATGATATGCATTCACCTGACAACATTGATGCTTTGAGAGGTCTTTTGGGCTCCATCCCAGACAATGCATTTCAGAAAAGTCCTGTGGGGACAAACTGGAATCTCAATAATAGAGTTGCATCTGTTTTATTTGGTGGTTTGAAGCTTGCTAGTGTTGGGTTTATCTCAAGTATAGGAGTTGTGGCTTCATCAAATGCACTGTTTGCAATTCGTAGATTCTTTGATCCAGCAGTTATTTCTAATCAACGGGTTATAAGATCACCAATACTCAAAACAGCAGTTGTTTATTCATGTTTTCTTGGGATATCTGCAAATCTTCGTTATCAGATTATAGCTGGAGTTGTGGAGCACCGGTTTTCCGAACAATTTTCATCCCAAACACTGCTTGTTAATATGATATCCTTTGTTGCTCGGACAGTCAATTCTTATTGGGGAAATCAGCAATGGATTGACATTGCCCGGTCTACTGGACTGCAAGTTAAAAAGACCGAATCATCCTCACTACAAGTACCAGATTCTCCCAATCAAGCTGCAATTGCGTGCAACGAAACAGAAGAAACTGGCGTTGACGATATCCACAGTAAATGA 1833 0.4228 MIYDATVIGEPSAIGKDKWKVWEKLMNARVVYLGEAEQVPVRDDKEVELEVVKNLHKRCIGSEKRLSLALEAFPSDLQEQLNQYIDKKIDGETLKSYTSHWPPQRWQEYEPLFSYCHDNEIRLIACGTPLKVLRTVQAEGVRGLSRADCKLYVPPAGSGFIAGFNSISRRSSGDMTNRNSSIPFSYLSAQARVVEDYTMSRIILQNVQEEGAGGMLVVVTGASHITYGSRGTGVPARISRKMQKKNQVVILLDPERQLIRREGEVPIADFLWYSAATPCSRNCFDRAEVARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHRFQGFRERLLADPKFLHRLAIEEAISITATLIAQYEKRKENFFEELDYVITDAVRGSVVDFFTVWLPAPTLSFLSYADDMHSPDNIDALRGLLGSIPDNAFQKSPVGTNWNLNNRVASVLFGGLKLASVGFISSIGVVASSNALFAIRRFFDPAVISNQRVIRSPILKTAVVYSCFLGISANLRYQIIAGVVEHRFSEQFSSQTLLVNMISFVARTVNSYWGNQQWIDIARSTGLQVKKTESSSLQVPDSPNQAAIACNETEETGVDDIHSK 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1118 610 Pfam Haem-binding uptake, Tiki superfamily, ChaN 21 238 IPR007314 -
Lele25g1118 610 Pfam Protein RETICULATA-related 345 529 IPR021825 -
Lele25g1118 610 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 2 606 - -
Lele25g1118 610 SUPERFAMILY EreA/ChaN-like 20 274 - -
Lele25g1118 610 CDD ChanN-like 29 249 IPR007314 -
Lele25g1118 610 Gene3D - 13 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1118 Lele-ChrLele25 7213243 7218528 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1118 25 7213243 7218528 Lele25g1118 25 7213243 7218528 ECH
Lele25g1118 25 7213243 7218528 Lele27g0960 27 17445559 17451355 hybridization