Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0848 ATGGTGCTTCAACACAGCTCCTCAATATCCCAGATTGCTCTTCTTAAGAACATGTCTGCTGCTGCGGAAATTGGGGCTGCTGAATTCCTTAAGGGTACATGTAGGCAAAGTCTGTTTTTTGTGAAGAAATCTCATTGGCAGAGGAGTAATTTGCTTTGGGGTACAGTTCGGAGTAGAAATCAAGTACGGGGTTCCACTAGAAGAGCCTTATCTTTGAGGTGCCATGGTCAAACAAATCCCCAAGCTGTGGTTGCTGGGGGTGTTAGTAGCTCTGTAGATGATCATTCTAGCTTGGTTGAGAAGCCTGCCTTGGAAGTTATTCATTTTTACCGGGTTCCATTGATCCAAGAAAGTGCAGCTACTGAACTACTCAAGGAGATTAAAATTAAAATCTCTGATCAGATATTGGCCTTGCAAACAGAGCAATGTTTCAATATTGGGATTGAAGCAAAACTTTCAAGTAACAAACTTTCAGTACTTAAATGGCTTCTTCAAGAAACATATGAACCTGAAGCATTGCAAACTGAGAGCTTTCTTGAGAAAAGAAGGAAGGAAGGTTTGAGTACGGTTATAATAGAGGTTGGCCCGAGGTTGTCATTTACCACAGCTTGGTCTACTAACGCTGTTGCAATTTGTCATTCATGTGGATTGACAGAGGTGACACGTTTGGAGCGTTCAAGGAGGTACTTGTTATATACTCAGGGTGATTTAGAAGATTTTCAAATCAATGAATTTGCAGCAATGGTGCATGATAGAATGACAGAATGTATTTACATCCAGAAGCTAACATCTTTTGAGACGAGTGTCATTCCAGAGGAAGTCTATCATATACCCATCATGGAGAAGGGGCAAAAGGCATTAGAAGAAATTAATCAACAAATGGGTTTAGCTTTTGATGACCAAGATATACAATACTACACTAAACTTTTCAGAGAGGATATTAAGCGTGATCCAACTAATGTTGAATTGTTTGATATTGCACAATCCAATAGTGAGCATAGCAGGCATTGGTTTTTTGCAGGAAAGATTATCATTGATGGGCAACTCATGGATAAGTCCCTAATGCAGATTGTGAAAGGAACTTTACAAGCAAATCCAAATAATTCAGTTATTGGATTTAAGGATAACTCCAGTGCAATTAGGGGTTTCCCAGTGAAGCAGTTGCGACCGGTTTGGCCTGGGTCAGCGTGTCCGTTAAACTTGACAGCACATGATCTAGATATCTTATTTACAGCTGAAACTCATAATTTTCCATGTGCAGTTGCTCCTTATCCTGGTGCAGAGACAGGTGCAGGAGGTCGCATTAGGGATACACATGCTACAGGAAGGGGTTCTTTTGTCCAGGCAGCTACGGCGGGTTATTGTGTTGGAAATCTCAACATGCCTGGGTCTTATGCTCAATGGGAAGACTCATCATTTACTTATCCTTCAAATCTAGCATCACCTTTGCAGATCCTCCTTGATTCTAGTAATGGTGCATCTGATTATGGCAACAAATTTGGAGAGCCTTTGATTCAAGGCTTTTGCAGGACTTTTGGAATGAGACTTCCTTGTGGGGAAAGGAGGGAATGGTTGAAACCAATAATGTTTAGTGCTGGCATTGGACAGATTGACCATATTCATATATCAAAGGGAGAGCCCGACATTGGAATGTTAGTTGTTAAGATTGGAGGCCCTGCTTATCGTATTGGTATGGGAGGTGGGGCAGCCTCGAGCATGGTCAGTGGCCAGAATGATGCAGAGCTTGATTTCAATGCTGTACAACGTGGGGATGCTGAGATGGCTCAAAAATTGTATCGTGTGGTTCGTGCTTGCATAGAAATGGGAGAGAAAAATCCAATTATCAGCATTCATGATCAGGGGGCTGGTGGGAATTGTAATGTTGTGAAGGAAATTATATACCCAAAGGGTGCTGAGATAGATATCAGAGCAGTTGTGGTTGGTGATCACACACTGTCTGTTCTTGAAATTTGGGGTGCAGAATATCAAGAGCAAGATGCAATCTTGGTGAGGCCTGAAAGTCATAATCTTTTACAATCAATCTGTGATAGAGAAAAGGTATCAATGACTGTGATTGGTGCTATTAATGGTAGTGGACGTGTTGTTTTAGTTGACACCTTAGCAACTCAGAAGTGTCTATCAAATGGACTTCCTCCTCCTTCCCCTGCTGTAGATCTTGAATTGGAGAAGGTACTTGGTGACATGCCTAAAAAATCTTTTAATTTTTCTCGAGTTGTTTATGAGCAAAATCCATTTGATCTAGCTCCAACGGTCACAGTAATGGATTCTTTGAAGAGGGTATTGCATTTGCCATCTGTTTGCTCAAAGCGCTTCTTGACAACAAAAGTTGATAGGTGTGTTACTGGTCTCGTTGCACAGCAGCAAACTGTTGGTCCTTTGCAAATTCCTCTTGCTGATGTTGCAGTTATTGCTCAGACTTTTACTGATGTGACTGGAGGTGCATGCGCCATTGGGGAGCAACCAATCAAAGGTTTGTTAGACCCTAAAGCAATGGCAAGGTTAGCTGTTGGAGAAGCACTCACAAATCTTGTATGGGCAAAGGTCACTTCCCTATCTGATGTTAAGGCAAGCGGTAATTGGATGTATGCTGCCAAGCTTGATGGGGAAGGAGCTTCCATGTATGATGCTGCTATATCTTTGTCAGAAGCAATGATTGAACTTGGTATTGCTATAGATGGTGGGAAAGACAGCCTTTCTATGGCAGCTCATGCTGGAGGTGAAGTTGTTAAGGCTCCAGGAAACCTTGTAATTAGTGTTTATGTCACTTGTCCTGATATTACAAAAACAGTGACACCTGATTTGAAACTTGAAGATGATGGTATTTTGCTTCATATTGATATGGCAAAAGGAAAGCGACGGTTAGGTGGATCTGCTCTTGCCCAGGTGTTTGACCAAGTTGGGGATCAATGTCCTGATCTTGATGATGTTCCTTACTTTAAAAGGGTCTTTGAGACAGTCCAAGACCTTCTTACAGATGGATTGATCTCTGCTGGACATGATATAAGTGATGGTGGGTTGCTAGTTTGTGCTTTAGAGATGGCATTTGCTGGAAATTGTGGGTTTACTTTGGACTTGACATCAAAAGGAAATAGTCTTTTTGAAACCCTTTATGCAGAAGAACTTGGGTTAATTGTTGAGGTGAGCAAGAAAAAGTTGAATACTGTGTTAGATAGGTTGAACAATGCTGGTTTGATCAGTGAGATTGTAGGACAAGTAACTGCTACTTCATTGATAGAAGTTAAGGTTGATGGGGTGACTTGTTTGAAAGAAAGTACTTCTATCCTTAGGGATATGTGGGAAGAAACCAGTTTTCAGCTGGAAAAGTTCCAAAGGTTGGCATCTTGTGTTGATATGGAAAGAGAAGGATTAAAACATAGATATGCACCTTCATGGAAACTGTCTTTTTCTCCTTCATTCACTGACAAAAAGTACATGCTTGCAACTTCTAAACCAAAAGTTGCTGTGATCAGAGAAGAAGGCAGCAATGGAGATAGAGAAATGGCCGCAGCATTTTATGCTGCTGGTTTTGAACCATGGGATATTACAATGTCAGACCTTCTTAATGGAGTGATCTCTTTGCAAGAGTTCCGTGGGATTGTTTTTGTTGGTGGATTTAGTTATGCAGACGTGCTTGATTCTGCCAAAGGATGGTCTGCTTGTATAAGATTTAATGAGCCTCTTATAAAGCAGTTTCAAGAATTTTATAACCGTTCAGATACTTTCAGCCTTGGAGTTTGCAATGGTTGTCAACTAATGGCTTTGTTGGGATGGGTACCAGGCCCACAGGTTGGAGGTGTACTTGGTGCTGGTGGGGACCTGTCACAGCCAAGATTCATTCACAATGAGTCTGGGCGATTTGAGTGCCGCTTTACAAGTGTGACAATAAAGGACTCTCTGGCAATAATGTTTAAAGGTATGGAGGGTAGTACTCTTGGGGTATGGGCTGCACATGGTGAGGGAAAAGCATATTTCCCAGATGAAGGTGTGCTTGATTGTATTGTTCATTCTGAGTTAGCTCCTGTAAGATATTGTGATGATGGTGGCAATCCGACAGAGCAATATCCTTTCAATGTAAATGGCTCTCCTTTAGGGGTTGCTGCTATTTGTTCTCCAGATGGACGACATCTTGCCATGATGCCTCATCCAGAGCGTTGCTTCTTAATGTGGCAGTTCCCATGGTATCCAAAGCAGTGGGACATGGACAAAAAGGGGCCTAGTCCATGGCTGCGCATGTTCCAAAATGCTAGAGAGTGGTGTTCTTTAAATGATTGCTCAGCTGCCGAAAATACAGCTGGGCGTTGTCTTCTGCCATTCCCAAGCTTCTTCTTTACTTGCTCAGGAAATTCTTCAGGTTTTGCAATTACTGTTGGTATTGGGAATGCTGCTGTTGAAACTAATTTTACTCAAGGGTTAACTTGGAAAGATGTACAAGTATTGGGAAGATTAAGTTTAGCAGCTCTGTTATCGGTGGCACCAGTTGGATATAATCGATTCCAAACATCAGTTGTTCTTGATCCAATTCTTGCTAGGAGCTTCTCTGACAGATTAGGGTTGTATATTGTACATGTTCATCCAATTAAAGAGCATTGGGAAACCCTAAGGCCTCCTGTCCTTCAAAGGCTGCCGTACTTCCTTGGAGGGCCGGTTCTTTTTGTATTGCATTTAATTTCTCTGCTTTACAATTGCTCAACATCTTCTTCTTCATCTCCCTCAGGACATGGTGCTTTGGCAAGCTTGCAGAAGTAA 4767 0.4183 MVLQHSSSISQIALLKNMSAAAEIGAAEFLKGTCRQSLFFVKKSHWQRSNLLWGTVRSRNQVRGSTRRALSLRCHGQTNPQAVVAGGVSSSVDDHSSLVEKPALEVIHFYRVPLIQESAATELLKEIKIKISDQILALQTEQCFNIGIEAKLSSNKLSVLKWLLQETYEPEALQTESFLEKRRKEGLSTVIIEVGPRLSFTTAWSTNAVAICHSCGLTEVTRLERSRRYLLYTQGDLEDFQINEFAAMVHDRMTECIYIQKLTSFETSVIPEEVYHIPIMEKGQKALEEINQQMGLAFDDQDIQYYTKLFREDIKRDPTNVELFDIAQSNSEHSRHWFFAGKIIIDGQLMDKSLMQIVKGTLQANPNNSVIGFKDNSSAIRGFPVKQLRPVWPGSACPLNLTAHDLDILFTAETHNFPCAVAPYPGAETGAGGRIRDTHATGRGSFVQAATAGYCVGNLNMPGSYAQWEDSSFTYPSNLASPLQILLDSSNGASDYGNKFGEPLIQGFCRTFGMRLPCGERREWLKPIMFSAGIGQIDHIHISKGEPDIGMLVVKIGGPAYRIGMGGGAASSMVSGQNDAELDFNAVQRGDAEMAQKLYRVVRACIEMGEKNPIISIHDQGAGGNCNVVKEIIYPKGAEIDIRAVVVGDHTLSVLEIWGAEYQEQDAILVRPESHNLLQSICDREKVSMTVIGAINGSGRVVLVDTLATQKCLSNGLPPPSPAVDLELEKVLGDMPKKSFNFSRVVYEQNPFDLAPTVTVMDSLKRVLHLPSVCSKRFLTTKVDRCVTGLVAQQQTVGPLQIPLADVAVIAQTFTDVTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKVTSLSDVKASGNWMYAAKLDGEGASMYDAAISLSEAMIELGIAIDGGKDSLSMAAHAGGEVVKAPGNLVISVYVTCPDITKTVTPDLKLEDDGILLHIDMAKGKRRLGGSALAQVFDQVGDQCPDLDDVPYFKRVFETVQDLLTDGLISAGHDISDGGLLVCALEMAFAGNCGFTLDLTSKGNSLFETLYAEELGLIVEVSKKKLNTVLDRLNNAGLISEIVGQVTATSLIEVKVDGVTCLKESTSILRDMWEETSFQLEKFQRLASCVDMEREGLKHRYAPSWKLSFSPSFTDKKYMLATSKPKVAVIREEGSNGDREMAAAFYAAGFEPWDITMSDLLNGVISLQEFRGIVFVGGFSYADVLDSAKGWSACIRFNEPLIKQFQEFYNRSDTFSLGVCNGCQLMALLGWVPGPQVGGVLGAGGDLSQPRFIHNESGRFECRFTSVTIKDSLAIMFKGMEGSTLGVWAAHGEGKAYFPDEGVLDCIVHSELAPVRYCDDGGNPTEQYPFNVNGSPLGVAAICSPDGRHLAMMPHPERCFLMWQFPWYPKQWDMDKKGPSPWLRMFQNAREWCSLNDCSAAENTAGRCLLPFPSFFFTCSGNSSGFAITVGIGNAAVETNFTQGLTWKDVQVLGRLSLAALLSVAPVGYNRFQTSVVLDPILARSFSDRLGLYIVHVHPIKEHWETLRPPVLQRLPYFLGGPVLFVLHLISLLYNCSTSSSSSPSGHGALASLQK 1588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0848 1588 FunFam Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial 936 1102 - -
Lele27g0848 1588 SUPERFAMILY Class I glutamine amidotransferase-like 1155 1426 IPR029062 -
Lele27g0848 1588 PANTHER PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE 105 1427 - -
Lele27g0848 1588 SMART GATase_5_2 1157 1426 - -
Lele27g0848 1588 Hamap Phosphoribosylformylglycinamidine synthase [purL]. 106 1427 IPR010073 GO:0004642|GO:0006189
Lele27g0848 1588 Gene3D Phosphoribosylformylglycinamidine synthase, linker domain 270 330 - -
Lele27g0848 1588 SUPERFAMILY PurS-like 107 265 IPR036604 -
Lele27g0848 1588 FunFam Phosphoribosylformylglycinamidine synthase, putative 537 715 - -
Lele27g0848 1588 FunFam Phosphoribosylformylglycinamidine synthase, putative 1102 1427 - -
Lele27g0848 1588 CDD PurL_repeat2 806 1079 - -
Lele27g0848 1588 Gene3D - 1103 1427 IPR029062 -
Lele27g0848 1588 TIGRFAM FGAM_synt: phosphoribosylformylglycinamidine synthase 109 1425 IPR010073 GO:0004642|GO:0006189
Lele27g0848 1588 SUPERFAMILY PurM C-terminal domain-like 547 781 IPR036676 -
Lele27g0848 1588 Gene3D - 331 536 IPR036921 -
Lele27g0848 1588 CDD PurL_repeat1 322 705 - -
Lele27g0848 1588 SUPERFAMILY FGAM synthase PurL, linker domain 270 337 - -
Lele27g0848 1588 CDD GATase1_FGAR_AT 1160 1423 - -
Lele27g0848 1588 Pfam CobB/CobQ-like glutamine amidotransferase domain 1157 1426 - -
Lele27g0848 1588 Pfam AIR synthase related protein, C-terminal domain 550 703 IPR010918 -
Lele27g0848 1588 Pfam AIR synthase related protein, C-terminal domain 960 1089 IPR010918 -
Lele27g0848 1588 FunFam Phosphoribosylformylglycinamidine synthase, putative 746 930 - -
Lele27g0848 1588 Pfam Formylglycinamide ribonucleotide amidotransferase linker domain 287 336 IPR041609 -
Lele27g0848 1588 Gene3D - 745 930 IPR036921 -
Lele27g0848 1588 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 1159 1403 - -
Lele27g0848 1588 FunFam Probable phosphoribosylformylglycinamidine synthase 331 536 - -
Lele27g0848 1588 Gene3D - 931 1102 IPR036676 -
Lele27g0848 1588 Gene3D - 537 711 IPR036676 -
Lele27g0848 1588 SUPERFAMILY PurM C-terminal domain-like 945 1141 IPR036676 -
Lele27g0848 1588 SUPERFAMILY PurM N-terminal domain-like 756 938 IPR036921 -
Lele27g0848 1588 Pfam Formylglycinamide ribonucleotide amidotransferase N-terminal 143 259 IPR040707 -
Lele27g0848 1588 FunFam Putative phosphoribosylformylglycinamidine synthase 270 330 - -
Lele27g0848 1588 SUPERFAMILY PurM N-terminal domain-like 338 545 IPR036921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0848 Lele-ChrLele27 16514080 16521503 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0848 27 16514080 16521503 Lele27g0848 27 16514080 16521503 ECH
Lele25g1231 25 8195837 8202547 Lele27g0848 27 16514080 16521503 hybridization
Lele26g1247 26 8161391 8164521 Lele27g0848 27 16514080 16521503 hybridization