Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0775 ATGTCTCTGCGGCTGGTAGCAGCCAATTTACTCAGAAAGTTTCGCTTTCCTTCTCGCAATGCTTCTACTTCTGTAGTAACCTCTAATGCCTTGCCCATCTCACTTCCTGGCAAAAGTATTACTTGTCATTGGCATGGAACTGGTGCTTATGGTTGGAGGACAGTTTTTAGTGGCCATTGTCTATGGATGGTGATATATGGACATCTTGCATTAATTATTGGCATTAATGCCAACCCTGTGTTTGCAAAAGATGAATCAACAGAAGCAGTTTTTGATAGTGACACTGAAAAGGATGACACAACTGGATTGCGAAAAATTGAGGATGGCTCTGTAATATCAAATATACACACATCAAAATGGAGGGTCTTTACTGATAAAGGGAGAGAATTTTTTCTTCAGGGAAAAATAGATGAAGCTGAAAAGCTCTTCCTTTCTGCAGTAGAAGAAGCTAGAGAAGGTTTTGGCCAGAGAGATCCACATGTTGCATCTGCATGCAACAATCTGGCTGAGCTGTACAGAGTCAAGAAGGCTTTTGACAAAGCAGAGCCACTGTATTTAGAAGCTATCAGCATATTGGAGGAATCATTTGGACCTGAAGATATAAGAGTGGGAGCTGCTTCTCATAACCTTGGGCAGTTCTTCCTTGGACAGCGGAAGTTGGAAGAAGCTCATGATTACTACGCGATGGCTTTGAAGGTGCTGTATCTTCAAGGAAAGGAAAGGGATGCTGAGGCCTTTATTCAGGACTCTATAAGAATGCTAGAGTTGCAATCACTCAGTACTTTGGCGTCATTGGAGTTAGCTAAGCAAGAATTGCTGGAAACTCAGGAAGAGCATACGAATCTTGAAGCTCGGAAGGCACTTGTTCAATGTGTTTACACTTATAGGGAGTATGTATCTGAGAAGTCAGTTGCTGATTCCCCTGAAATAAAGAACGAGTATCTTTCATGTTTAAAGCGCGCTCAAAACTTGCTTGGTGGTAAATTTGCTGAGGAGCCAACCAATTAA 1008 0.4187 MSLRLVAANLLRKFRFPSRNASTSVVTSNALPISLPGKSITCHWHGTGAYGWRTVFSGHCLWMVIYGHLALIIGINANPVFAKDESTEAVFDSDTEKDDTTGLRKIEDGSVISNIHTSKWRVFTDKGREFFLQGKIDEAEKLFLSAVEEAREGFGQRDPHVASACNNLAELYRVKKAFDKAEPLYLEAISILEESFGPEDIRVGAASHNLGQFFLGQRKLEEAHDYYAMALKVLYLQGKERDAEAFIQDSIRMLELQSLSTLASLELAKQELLETQEEHTNLEARKALVQCVYTYREYVSEKSVADSPEIKNEYLSCLKRAQNLLGGKFAEEPTN 335
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0775 335 Gene3D Tetratricopeptide repeat domain 122 325 IPR011990 GO:0005515
Lele27g0775 335 Coils Coil 262 285 - -
Lele27g0775 335 SUPERFAMILY TPR-like 118 233 IPR011990 GO:0005515
Lele27g0775 335 SMART tpr_5 120 153 IPR019734 GO:0005515
Lele27g0775 335 SMART tpr_5 162 195 IPR019734 GO:0005515
Lele27g0775 335 SMART tpr_5 204 237 IPR019734 GO:0005515
Lele27g0775 335 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 256 328 - -
Lele27g0775 335 Pfam Tetratricopeptide repeat 163 233 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele27g0775 Lele-ChrLele27 15810833 15821374 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1313 25 8958021 8968419 Lele27g0775 27 15810833 15821374 hybridization
Lele26g1320 26 8901562 8910256 Lele27g0775 27 15810833 15821374 hybridization