Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0607 ATGGCGCCTGTGACCACAGGCGCTATTGTTGGCGTGGCGGCCATCTTTGTCTCAGTCGCTTTCTCCTATTGCTTCTGCGACCGTCGCACTAAATCTTACTCCATAAACCCCCACTCACCTTCGCCAAAGAAGAAGAAATCGAGGAAGGGGCTCGTTGATGCCATTGGTAACACGCCTTTAATTCGAATTACCAGCCTCTCCGAAGCCACGGGTTGTGATATTCTTGCGAAGTGCGAGTTTTTTAACCCTGGAGGTAGTGTGAAAGATCGAGTTGCAGTGAAAATCATTGAAGAGGCTTTATCATCTGGCCAGCTACGCCCAGGTGGAATAGTTACCGAAGGGAGTGTTGGAAGCACTGCCGTTAGCCTTGCCACTGTTGCGCCTGCCTATGGATGCAAATGCCATTTGGTTATCCCAGATGATGTTGCAATTGAAAAGGCTCAGATAATTGAGGCCCTAGGAGCTACTGTTGAAAGAGTTAGACCAGTGTCAATCACTCACAAAGACCATTTTGTAAATGTTGCAAGAAGACGGGCATCAGAAGCAAATGAGTTGATGTTAGAACAGAGAAAAAAATTACAATTGAATGGCGGAGATATTAAACCGATTAATGGTTACAGATCTGATGGGGATAATCACAGTTCATCTTTTTCTACGGATTTTCAAGGCGGCTTCTTTGCTGATCAGTTTGAGAATTTGGCGAACTTCAGGGCCCACTTTGAGGGTACAGGACCCGAGATTTGGAAACAGACGAATGGAAAGTTGGATGCATTTGTTGCAGGAGCTGGCACTGGTGGCACTTTGGCTGGTGTTTCTAGGTTTCTTCAGGAAAAGAATCCAAACATCAAGTGCTTCCTCGTAGATCCTCCTGGTTCTGGCTTGTTCAATAAGGTAACAAGGGGTGTGATGTATACCAGAGAGGAAGCAGAAGGAAAAAGGCTCAAGAATCCATTTGATACCATAACAGAAGGAATTGGATGTAACAGGATAACAAAGAATTTTATGATGGCCAAAGTTGATGGTGCTTTTCAAGCCACAGATATGGAGGCTGTTGAAATGTCTAGGTTTCTTTTGAAGAACGATGGACTATTTCTTGGGAGTTCTTCATCAATGAATTGTGTTGGAGCAGTTAGAGTAGCACAGTCGCTTGGCCCTGGTCATACAATTGTAACCATTCTCTGTGACAATGGAATGAGACATCTGAGTAGGTTCCACAATCCTCAGTATCTGTCTCAGCTTGGCTTGACTCCTAAAGCAACTGGATTAGAGTTTCTGGGATTAGATGCAGCTGAAGTCTGCTTTGATCTTTCTAGGCATCTGATGGATAGGCCACCTAGAACTATAAACTGGGTTTCTGTCAAGATTTGTTGCCATATGCGAGTGAACAGTTATGCATTCTTGACCATGGAATTTGTCCAGTTCAAATTGTCTGGAAATAGGGCGATGAATGAAAACTTCAACCCTTTTGCTTTGGAAATGTCAGATTCAATTCTACTGTGA 1500 0.44 MAPVTTGAIVGVAAIFVSVAFSYCFCDRRTKSYSINPHSPSPKKKKSRKGLVDAIGNTPLIRITSLSEATGCDILAKCEFFNPGGSVKDRVAVKIIEEALSSGQLRPGGIVTEGSVGSTAVSLATVAPAYGCKCHLVIPDDVAIEKAQIIEALGATVERVRPVSITHKDHFVNVARRRASEANELMLEQRKKLQLNGGDIKPINGYRSDGDNHSSSFSTDFQGGFFADQFENLANFRAHFEGTGPEIWKQTNGKLDAFVAGAGTGGTLAGVSRFLQEKNPNIKCFLVDPPGSGLFNKVTRGVMYTREEAEGKRLKNPFDTITEGIGCNRITKNFMMAKVDGAFQATDMEAVEMSRFLLKNDGLFLGSSSSMNCVGAVRVAQSLGPGHTIVTILCDNGMRHLSRFHNPQYLSQLGLTPKATGLEFLGLDAAEVCFDLSRHLMDRPPRTINWVSVKICCHMRVNSYAFLTMEFVQFKLSGNRAMNENFNPFALEMSDSILL 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0607 499 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 77 95 IPR001216 GO:0006535
Lele27g0607 499 Gene3D - 89 231 IPR036052 -
Lele27g0607 499 Pfam Pyridoxal-phosphate dependent enzyme 53 395 IPR001926 -
Lele27g0607 499 FunFam Cysteine synthase 237 401 - -
Lele27g0607 499 PANTHER CYSTATHIONINE BETA-SYNTHASE 49 409 - -
Lele27g0607 499 CDD CBS_like 56 402 - -
Lele27g0607 499 Coils Coil 176 196 - -
Lele27g0607 499 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 48 406 IPR036052 -
Lele27g0607 499 FunFam Cysteine synthase, putative 55 84 - -
Lele27g0607 499 Gene3D - 54 402 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0607 Lele-ChrLele27 14049900 14054581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g0607 55 402 Miscellaneous Gene Families AT3G04940 29.714 2.70e-34 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1471 25 10998939 11004546 Lele27g0607 27 14049900 14054581 hybridization
Lele26g1503 26 10938845 10942741 Lele27g0607 27 14049900 14054581 hybridization