Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0483 ATGGAATTAATAGATCACGAATCGACTGTTTGGTCATTGGCTCTCTTGAGTTTGGTTTTGGTGTTAGGGGTTGAAGATGAGAATTTGTACATCAGGTACGGCTTGAAGAAGAGAGTGCTAGGCTTTAAAATTGTGTATTCACTACAAAAGATACTTATTTTGCTCAAACTATTAGCAGCAACCAGCTGCAGCTACTCTGCTACATGTAGGTCCCTCTCCTCTTGGATCTTTAATCCAACTAAAACCAAGCTCCTTCGCTCACTTTCTAGAATTTCTTCGAAGTGTTTCTGCTCCTTCCCCCTAACTTGCGGACACACTTCTGCCTACAAGAGTTCCATGAACTTGTTGAGCAGACTTGGGGTCGGGAGCACAAGAACTCCTGAGAATTCGGACTCCTCAATGGCTCAATATTCAGATGATGATGAATGTGAACCAGGCCAGCGGTTTGCGCAGTTTGGTGGTGGCTGCTTTTGGGGTGTTGAGTTGGCCTTTCAGAGGGTGCCTGGGGTGACTAAGACAGAGGTTGGTTACAGCCAGGGCTTCGTACATAATCCAACTTATGAGGATGTCAGTTCTGGGACCACAAATCACTCAGAGGTTGTCAGGGTCCAATATGATCTTAAAGAATGTAGCTATGAGACTTTGCTTGATGTTTTCTGGACTAGGCATGATCCTACCATGTTGAATCGGCAGGGAAATGATGTGGGAACTCAGTACAGATCTGGAATTTACTACTATACAGCAGAACAAGAGAAGGCAGCTAGAGAGTCTTTGGAACAGCATCAGAAGCGGTTGAGCCGGAAGATCGTTACAGAGATACTTCCGGCCAAGAAGTTTTATCGAGCAGAAGAATACCATCAGCAGTACCTGGAGAAAGGTGGGAGATTTGGTTACAAGCAATCTGCTGCTAAGAGATGCAACGATCCAATCCGATGTTATGGCTAA 945 0.4497 MELIDHESTVWSLALLSLVLVLGVEDENLYIRYGLKKRVLGFKIVYSLQKILILLKLLAATSCSYSATCRSLSSWIFNPTKTKLLRSLSRISSKCFCSFPLTCGHTSAYKSSMNLLSRLGVGSTRTPENSDSSMAQYSDDDECEPGQRFAQFGGGCFWGVELAFQRVPGVTKTEVGYSQGFVHNPTYEDVSSGTTNHSEVVRVQYDLKECSYETLLDVFWTRHDPTMLNRQGNDVGTQYRSGIYYYTAEQEKAARESLEQHQKRLSRKIVTEILPAKKFYRAEEYHQQYLEKGGRFGYKQSAAKRCNDPIRCYG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0483 314 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 147 304 IPR002569 GO:0008113
Lele27g0483 314 Gene3D Peptide methionine sulphoxide reductase MsrA 133 314 IPR036509 GO:0008113
Lele27g0483 314 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 133 313 - -
Lele27g0483 314 SUPERFAMILY Peptide methionine sulfoxide reductase 144 302 IPR036509 GO:0008113
Lele27g0483 314 Pfam Peptide methionine sulfoxide reductase 150 294 IPR002569 GO:0008113
Lele27g0483 314 FunFam Peptide methionine sulfoxide reductase 137 314 - -
Lele27g0483 314 Coils Coil 248 268 - -
Lele27g0483 314 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 150 293 IPR002569 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0483 Lele-ChrLele27 8270088 8273608 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1724 02 20761364 20769832 Lele27g0483 27 8270088 8273608 CCT
Lele03g1438 03 8759804 8761201 Lele27g0483 27 8270088 8273608 CCT
Lele04g1708 04 21683242 21684633 Lele27g0483 27 8270088 8273608 CCT
Lele25g1649 25 23514287 23517759 Lele27g0483 27 8270088 8273608 hybridization