Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1649 ATGGAATCAATAAATCACGAATCGAATGTTTGGTCATTGGCTCTCTCGAGTTTGGTTTTGGTGTTAGGTTTGTTAGGGTTGAAGATGAGAATTTGTGCTTCAGCAACCAGCTGCAGCTACTCTGCTACATGTAGGTCCCTCTCCTCTTGGATCTTTAATCCTACTAAAACCAAGCTCCTTCGCTCACTTTCTAGAATTTCTTCGAAGTGTTTCTGCTCCTTCCCCCTAACTTGCGGACACACTTCTGCCTACAAGAGTTCCATGAACTTGTTGAGCAGACTTGGGGTCGGGAGCACAAGAACTCCTGAGAATTCGGACTCCTCAATGGCTCAATATCCAGATGATGATGAATGTGAACCAGGCCAGCGGTTTGCGCAGTTTGGTGGTGGCTGCTTTTGGGGTGTTGAGTTGGCCTTTCAGAGGGTGCCTGGTGTGACTAAGACTCAGGTTGGTTACAGCCAGGGCATCGTCCATAATCCAACTTATGAGGATGTCTGTTCTGGGACCACAAATCACTCAGAGGTTGTCAGGGTCCAATATGATCTTAAAGAATGTAGCTATGAGACTTTGCTTGATGTTTTCTGGACTAGGCATGATCCTACCATGTTGAATCGGCAGGGAAATGATGTGGGAACTCAGTACAGATCTGGAATTTACTACTATACAGCAGAACAAGAGAAGGCAGCTAGAGAGTCTTTGGAACAGCTTCAGAAGCAGTTGAGCCGGAAGATCGTTACAGAGATACTTCCGGCCAAGAAGTTTTATCGAGCAGAAGAATACCATCAGCAGTACCTGGAGAAGGGTGGGAGATTTGGTTACAAGCAATCTGCTGCTAAGAGGTGCAACGATCCAATCCGATGTTATGGCTAA 870 0.4609 MESINHESNVWSLALSSLVLVLGLLGLKMRICASATSCSYSATCRSLSSWIFNPTKTKLLRSLSRISSKCFCSFPLTCGHTSAYKSSMNLLSRLGVGSTRTPENSDSSMAQYPDDDECEPGQRFAQFGGGCFWGVELAFQRVPGVTKTQVGYSQGIVHNPTYEDVCSGTTNHSEVVRVQYDLKECSYETLLDVFWTRHDPTMLNRQGNDVGTQYRSGIYYYTAEQEKAARESLEQLQKQLSRKIVTEILPAKKFYRAEEYHQQYLEKGGRFGYKQSAAKRCNDPIRCYG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1649 289 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 122 279 IPR002569 GO:0008113
Lele25g1649 289 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 125 268 IPR002569 GO:0008113
Lele25g1649 289 Pfam Peptide methionine sulfoxide reductase 125 269 IPR002569 GO:0008113
Lele25g1649 289 Gene3D Peptide methionine sulphoxide reductase MsrA 108 289 IPR036509 GO:0008113
Lele25g1649 289 Coils Coil 223 243 - -
Lele25g1649 289 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE 79 288 - -
Lele25g1649 289 FunFam Peptide methionine sulfoxide reductase 112 289 - -
Lele25g1649 289 SUPERFAMILY Peptide methionine sulfoxide reductase 119 277 IPR036509 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1649 Lele-ChrLele25 23514287 23517759 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1724 02 20761364 20769832 Lele25g1649 25 23514287 23517759 CCT
Lele03g1438 03 8759804 8761201 Lele25g1649 25 23514287 23517759 CCT
Lele04g1708 04 21683242 21684633 Lele25g1649 25 23514287 23517759 CCT
Lele25g1649 25 23514287 23517759 Lele27g0483 27 8270088 8273608 hybridization