Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1403 ATGGAAGATCTCAAGCCGCACCCTGTAAACTCTTCTCCGCTCACTCCATTAGGCTTCCTTGACAGAGCTGCCACCGTCTACGGCGGATGCACTTCTATCATCTATAACAACACCTCCTTCACTTGGTCCCAAACCCACCGTCGCTGTCTCCAACTAGCCTCCTCTCTCTCCTCCATCGGAATCCGTCGCGGTCATGTCGTCTCCGTCGTGGCACCCAACATCCCCGCCATGTACGAGCTCCACTTCGCAGTTCCTTTCGCCGGCGTCATCCTCAACAACATCAACACTCGCCTTGACGCTCACACCATCTCCATCATCCTCCGCCATGGTGAATCCAAGCTCGTATTTGTTGATTGCGTCTCACGCGCTCTGGTACTCGACGCCATCTCCTTGCTGCCTCCGGAGACTCAACGACCTATCCTTATACTCATCAATGACGACTCAGTGGAACCCACATCATCAGAGGGCTTCTTTGATACTTACGAAGGATTGGTGGCTAAGGGTGATCCTAATTTCCAGTGGATCCGACCCAAAAGCGAGTGGGATCCGATGCTCTTGAATTACACTTCCGGTACGACATCGTCTCCGAAGGGGGTGGTTCATTGCCATCGAGGTACGTTCGTCGTAACCGTCGATTCTCTGATCGACTGGACAGTTCCCAAACAACCTGTCTACCTCTGGACGCTGAATATGTTCCACTCTAACGGTTGGAGCTTCCCCTGGGGAATCGCAGCCATGGGAGGGACCAATATCTGCCTCCGTAAATTCGATGCCACCACCGTGTTCACTCTGATCGAACGCCATGGCGTTACCCACATGTCCGCTGCACCGGTGGTGCTCAACATGTTAACAAACTCCCTGACAATAAAACCTCTGAGAAGTCCCGTTCAAGTCCTCACGGGAGGAGCGCCGCCACCTGCGGCAGTGCTAAACCGAGCGGAAGAGTTAGGATTTGTGATTAAAGACCGATCAAAGGACGTGATTATAAGTGGTGGTGAGAATCTGAGCAGCGTGGAGGTTGAATCGGTACTGTACACCAACCCGGCGATAAACGAGGCGGCGGTGGTGGCGAGGCCGGACGAGTTATGGGGAGAGACGCCGTGCGCGTTCGTGAGCTTGAGGGAAAGATTGGAGAAGATGCCGACGGAGAAGGAGATAATGGAGTATTGCAGAAAGAGGATGCCGCACTTCATGGCGCCGAAGACGGTGGTGTTCATGGAAGATCTTCCAAAGACTTCGACTGGTAAGATTCAGAAGTTTTTGCTGAGAAAAGAAGCCAGAGATATGGGGTTCTTGAAACACAGCAGATTGTGA 1314 0.5289 MEDLKPHPVNSSPLTPLGFLDRAATVYGGCTSIIYNNTSFTWSQTHRRCLQLASSLSSIGIRRGHVVSVVAPNIPAMYELHFAVPFAGVILNNINTRLDAHTISIILRHGESKLVFVDCVSRALVLDAISLLPPETQRPILILINDDSVEPTSSEGFFDTYEGLVAKGDPNFQWIRPKSEWDPMLLNYTSGTTSSPKGVVHCHRGTFVVTVDSLIDWTVPKQPVYLWTLNMFHSNGWSFPWGIAAMGGTNICLRKFDATTVFTLIERHGVTHMSAAPVVLNMLTNSLTIKPLRSPVQVLTGGAPPPAAVLNRAEELGFVIKDRSKDVIISGGENLSSVEVESVLYTNPAINEAAVVARPDELWGETPCAFVSLRERLEKMPTEKEIMEYCRKRMPHFMAPKTVVFMEDLPKTSTGKIQKFLLRKEARDMGFLKHSRL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1403 437 Pfam AMP-binding enzyme C-terminal domain 339 416 IPR025110 -
Lele26g1403 437 SUPERFAMILY Acetyl-CoA synthetase-like 9 429 - -
Lele26g1403 437 Gene3D - 325 429 IPR045851 -
Lele26g1403 437 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Lele26g1403 437 PANTHER ACYL-ACTIVATING ENZYME 4 319 - -
Lele26g1403 437 FunFam 2,3-dihydroxybenzoate-AMP ligase 325 430 - -
Lele26g1403 437 Gene3D - 3 324 IPR042099 -
Lele26g1403 437 Pfam AMP-binding enzyme 21 317 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1403 Lele-ChrLele26 9856690 9858336 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g1403 315 429 EF-hand Containing Proteins AT1G21540 62.712 1.74e-43 158
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1403 26 9856690 9858336 Lele26g1403 26 9856690 9858336 ECH
Lele26g1403 26 9856690 9858336 Lele27g0706 27 15079493 15082945 hybridization
Lele26g1403 26 9856690 9858336 Lele28g1388 28 10016053 10025354 hybridization