Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0388 ATGAGGGTTAACCAGGTTGAGTCCCCCCGAGACGAGCACGGATCGTCGATTCTCGATCTTGCTAGGGCCGACATCAACGAATCATCAACCAAAACTAGAAACTGTTCTGGTTGTCCGGGGTCTGGGTCAATGGAGTTTCAGTCGCCATACCCAGACCAAGTCCTCGAGAATGTGCTGGAGAACGTCCTCCACTTCCTTACGGCGCGCCGCGACCGCAACGCTGCCTCATTGGTCTGCAAGTCATGGTACCGTGCCGAGGCCCTCACCCGATCCGAACTCTTCATCGGTAATTGCTATGCGGTGTCGCCGCGCCGCGCCACCTCCCGGTTCACCCGGGTCCGTTCCGTCGCGATTAAAGGGAAGCCGAGGTTCGCAGACTTCGATCTGATGCCGTTCAACTGGGGGGCCCACTTTTCGCCGTGGGTCGCTGCCATGGCCAAGGCTTATCCTGGGCTGGAGAAGGTTTATCTCAAGCGCATGTGTGTGACGGACGAGGATCTGGTTCTTCTCTCTGAATCCTTCCCCTGCTTCAAAGAGCTTGTCCTTGTATGCTGCGAAGGGTTTGGGACCAGTGGTCTTGCCGCCGTTGCCGGAAGATGCAGACAGCTGAGAGTACTTGATCTTGTTGAATCTGAGGTCGAGGACGATGAAGTGGAATGGCTATCATATTTTCCAGAAAGTCAAACCCATTTGGAATCTCTTGTTTTCGATTGCTTAGAGTTCCCTATTAATTTCGATGCATTGGAGAGACTAGTGGCTAGGTCACCTTCGTTAAAGAAACTTAGGTTGAATGGTTTTGTTACCACGTCTCAGCTTTACCGCCTGATTATTCGTGCGCCGCAGCTCACTCATCTTGGAACAGGTTCATTCAGTGCATCAGAGGCTGTAGCTGACGGTGATCAGGATCCAGATTATGCCTCTGCATTTGCAGCTTGCAAATCCTTAGTTTGTCTATCTGGATTCAGGGAGATTTTCCCAGATTACCTTCCTGCAATCTATCCAGTTTGCACCAATCTCACATCTTTGAATTTCAGCTATGCCAATATTAATGCTGAACAGCTGAAACCAGTCATTTGCCACTGTCATAAACTGCAGACATTATGGGTCCTGGATTCAGTGCGTGATGAAGGGCTTCAAGCAGTGGCTGCAACTTGCAAGGATCTCCGTGAGCTTCGGGTCTTTCCTGAAAATGCTAATGAGGATGCTGAGGGGCCAGTTTCTGAGGTGGGCTTTCAAGCAATTTCTGAAGGTTGTAATAAATTACAATCAATTTTGTATTTCTGCCAAAGAATGACAAATGCAGCTGTAGTAGCCATGTCAAAGAATTGCCCAGATCTAGTAGTTTTTCGTCTTTGTATCATTGGGCGATACCGGCCAGATGCGTTGACTGGAGAACCCATGGATGAGGGTTTTGGTGCCATTGTTATGAATTGTAAGAAGCTCACTCGACTTGCTGTATCTGGTTTACTGACTGACCGAGCTTTTGGTTACATTGGGAAATATGGGAAATTGGTTAGGACACTGTCAGTTGCTTTTGCTGGTGACACTGACTTGGGGCTTAAATATGTTTTAGAGGGATGCCATAATCTGCAAAAACTTGAAATCAGGGATAGTCCATTTGGTGATGAAGCTTTACATTCTGGTTTGCATCATTATTACAACATGAGGTTTGTCTGGATGTCATCTTGTAAACTGACTCGCCATGCTTGCCAAGAAGTCGCACGAGCACTGCCTCATCTGGTGGTAGAAGTGATTAGAGGTGAAGAGGAGATCAATGTTGATGATACTGTTGAGACATTATACATGTATCGATCCCTTGATGGACCAAGAGACGATGCTCCCAAATTTGTTACCATCATGCAGTAG 1866 0.4786 MRVNQVESPRDEHGSSILDLARADINESSTKTRNCSGCPGSGSMEFQSPYPDQVLENVLENVLHFLTARRDRNAASLVCKSWYRAEALTRSELFIGNCYAVSPRRATSRFTRVRSVAIKGKPRFADFDLMPFNWGAHFSPWVAAMAKAYPGLEKVYLKRMCVTDEDLVLLSESFPCFKELVLVCCEGFGTSGLAAVAGRCRQLRVLDLVESEVEDDEVEWLSYFPESQTHLESLVFDCLEFPINFDALERLVARSPSLKKLRLNGFVTTSQLYRLIIRAPQLTHLGTGSFSASEAVADGDQDPDYASAFAACKSLVCLSGFREIFPDYLPAIYPVCTNLTSLNFSYANINAEQLKPVICHCHKLQTLWVLDSVRDEGLQAVAATCKDLRELRVFPENANEDAEGPVSEVGFQAISEGCNKLQSILYFCQRMTNAAVVAMSKNCPDLVVFRLCIIGRYRPDALTGEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFGYIGKYGKLVRTLSVAFAGDTDLGLKYVLEGCHNLQKLEIRDSPFGDEALHSGLHHYYNMRFVWMSSCKLTRHACQEVARALPHLVVEVIRGEEEINVDDTVETLYMYRSLDGPRDDAPKFVTIMQ 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0388 621 FunFam Transport inhibitor response 1 91 620 - -
Lele25g0388 621 SMART LRR_CC_2 418 442 IPR006553 -
Lele25g0388 621 SMART LRR_CC_2 361 384 IPR006553 -
Lele25g0388 621 SMART LRR_CC_2 527 551 IPR006553 -
Lele25g0388 621 SMART LRR_CC_2 174 199 IPR006553 -
Lele25g0388 621 SMART LRR_CC_2 478 501 IPR006553 -
Lele25g0388 621 FunFam Transport inhibitor response 1-like protein 45 90 - -
Lele25g0388 621 SUPERFAMILY F-box domain 51 85 IPR036047 GO:0005515
Lele25g0388 621 Gene3D Ribonuclease Inhibitor 92 620 IPR032675 -
Lele25g0388 621 SUPERFAMILY RNI-like 77 582 - -
Lele25g0388 621 Pfam Transport inhibitor response 1 protein domain 112 157 IPR041101 -
Lele25g0388 621 Pfam F-box 52 91 IPR041567 -
Lele25g0388 621 Gene3D - 45 90 - -
Lele25g0388 621 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 160 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0388 Lele-ChrLele25 2352504 2354805 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0388 25 2352504 2354805 Lele28g0397 28 2433814 2436115 hybridization