Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1922 ATGTTACAAAGGCTTCACAGAGCCCTCCGATCTTCTCAACCACTCCATGTTCCGTCTCCGACACTCTCACCACCATCTCCTTCACAACTCCACCCACCACCCACCACGTCCCCATCTCTTCCCATCCTCAACCTCCAATGCAGGCTATCACGTCGACAGCTCACAGTTTGTAGCAACTCTTGCTTGCTCCTTCTTCTGGGTGCTCATGCACTACCTCTCCCCTCATCTTTAAGAGCTCAAGAAAGTGACCAGAGTCCAGAGAGTTCGAGGGTCAATGATAATGGCTGCGCCGAGAGAAAGCCCACCAAGACCGTGTTCTTTGACATCTCCATTGATGGTGAACCAGCTGGTCGCATTACCATGGGGCTTTATGGAGATGATGTCCCCACTGGGGTTGATAGTTTCAGTAAGATTGTTAGCGGAGCGGCGGGGATTAGCTACAGAAGAAAAGAGTTTATCAAAATCATGCCCAACTACGTGCAGCATGGTGGACTTAGATCCTATGGGGTGGATGCAGAACTTGCAAAGAGCAGAGGAAACGATTTGGGAAGGGAGAGTCTTGTTGAAGAGTGGGAGAGAACATACGAGGGATGTCCAGGCACAAAGAACTTGGCAGGAAGCGTAGGCATTATTGTGAGAGATCCATCAAAACCCCCTCCAAAGCTGAAGCTGGTTGCGAGAAAAGGGAAGCTAGAGATAGATCAAGAGGAGGTTGGAGTTGAGCCCAATGGGACTGAGTTTGTGATTGCTACAAAGGATTCTCCAGAATTGGACGAATCAGCTCTTGTCATCGGAAGAGTGGTGGAAGGAATGGAGGTTGTAGAGAGGATTGCACAGGTGAAAACTGTACAGGATAATACGGGTTCTCCTTATTTCAGGGTAGCAAAACTAATAGGAGACAAGAGGGCCGTTGTAGCAGAAAGAGGATTCAACCGCCCTTATTCAAAAGTTGTGGTTACAAACTGTGGTGTATTGGAGTGA 981 0.4862 MLQRLHRALRSSQPLHVPSPTLSPPSPSQLHPPPTTSPSLPILNLQCRLSRRQLTVCSNSCLLLLLGAHALPLPSSLRAQESDQSPESSRVNDNGCAERKPTKTVFFDISIDGEPAGRITMGLYGDDVPTGVDSFSKIVSGAAGISYRRKEFIKIMPNYVQHGGLRSYGVDAELAKSRGNDLGRESLVEEWERTYEGCPGTKNLAGSVGIIVRDPSKPPPKLKLVARKGKLEIDQEEVGVEPNGTEFVIATKDSPELDESALVIGRVVEGMEVVERIAQVKTVQDNTGSPYFRVAKLIGDKRAVVAERGFNRPYSKVVVTNCGVLE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1922 326 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 106 324 IPR002130 GO:0000413|GO:0003755
Lele24g1922 326 MobiDBLite consensus disorder prediction 18 37 - -
Lele24g1922 326 SUPERFAMILY Cyclophilin-like 100 325 IPR029000 -
Lele24g1922 326 MobiDBLite consensus disorder prediction 1 37 - -
Lele24g1922 326 FunFam Peptidyl-prolyl cis-trans isomerase B 95 326 - -
Lele24g1922 326 MobiDBLite consensus disorder prediction 77 92 - -
Lele24g1922 326 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 259 274 IPR002130 GO:0000413|GO:0003755
Lele24g1922 326 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 123 138 IPR002130 GO:0000413|GO:0003755
Lele24g1922 326 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 246 258 IPR002130 GO:0000413|GO:0003755
Lele24g1922 326 MobiDBLite consensus disorder prediction 77 97 - -
Lele24g1922 326 Gene3D - 93 326 IPR029000 -
Lele24g1922 326 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC 7 326 IPR044185 -
Lele24g1922 326 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 107 285 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1922 Lele-ChrLele24 23876669 23877970 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1922 24 23876669 23877970 Lele24g1922 24 23876669 23877970 ECH
Lele21g2006 21 26929945 26930518 Lele24g1922 24 23876669 23877970 hybridization
Lele22g1971 22 24300343 24301654 Lele24g1922 24 23876669 23877970 hybridization