Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g2006 ATGACCAACTACGTGCAACACGGGGGACTTAGATCCTATTGGGTGGACGCAGAACTTGCAATTTTGGGAAGGGAGAGTCTTGTTGAAGAGTGGGAGAGAACGTACGAGGGATGTCCAGCCACAAAGAACTTGGCTGGAAGCGTAGGCATTGTTGTGAGAAATCCATCAAAACCCCCTCCAAAGCTGAAGCTGGTTGCAAGAAAAGGGAAGCTAGAGATTGATCAAGAGGAGGTTGGGGTTGAGCCCAATGGGACTGAGTTTGTGATTGCCACAGAGGATTCTCCGGAATTGGACGAATCAGCTCTTGTCATTGGAGGAGTGGTGGAAGGAATGGAGGTTGTAGAGAGGATTGCACAAGTGAAAACTGTAGAGGAGAATACGGGTTCTCCTTATTTCAGGGTAGCAAAACTAAGAGGGGACAAGAGGGCCGTTGTAGCAGAAAGAGGATTCAACCGCTCTTATTCAAAAGTTGTGATTACAAACTGTGGTGTATTGGAGTGA 501 0.475 MTNYVQHGGLRSYWVDAELAILGRESLVEEWERTYEGCPATKNLAGSVGIVVRNPSKPPPKLKLVARKGKLEIDQEEVGVEPNGTEFVIATEDSPELDESALVIGGVVEGMEVVERIAQVKTVEENTGSPYFRVAKLRGDKRAVVAERGFNRSYSKVVITNCGVLE 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g2006 166 Gene3D - 32 136 IPR029000 -
Lele21g2006 166 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 164 IPR002130 GO:0000413|GO:0003755
Lele21g2006 166 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC 1 166 IPR044185 -
Lele21g2006 166 SUPERFAMILY Cyclophilin-like 79 165 IPR029000 -
Lele21g2006 166 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 67 126 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g2006 Lele-ChrLele21 26929945 26930518 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g2006 21 26929945 26930518 Lele21g2006 21 26929945 26930518 ECH
Lele21g2006 21 26929945 26930518 Lele24g1922 24 23876669 23877970 hybridization