Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1903 ATGTATGAAGGAATAGAGGTGAGGAAGACGAAGATCTGCGTCACTACAGCGGCATCGGCATCGTTCTCCAACACGAACACGGACCTCACCATCGCCATGGCCCTGATTTTTCTGGTCTCCTTTCCGCCGATGGCTGTCGTCAAAGGAAGAAGCTTAAGAACAACCGTCGCCCCACAAGAAACGCACAGTGATGATCAGCACAGATCAGTGATCGCAGAAATGTGGAAGCTGCTTCTACACAGCTCTCGTCGCAGCTCCATTCGGCGTTCCGTGGCATTTGTCGAAACTCTGTCCTCTCCTTCATCCTTTTCTGCTCCTCTTCCTCATTTCCCATTTCAATGCACCCCCGATCTCTCTCTTCCGTCTCATTCCCAATCTTTCCCACCCTTTCAGCCCCTCGCTTTCCTGTCACTCGTTGCCTTCCATTCTTCGTCCTCTTCTTTCGACTCAAAATCGAAACAAGAGTTGGCTGGCAAGGATTCCGGGCCTGAAGGTGGCATCAATAATCGTAGTGCCATATTTGCCGACGAGGACTATCCGACTGGCGACTTTGACTTTGTGCCCGTTACTGGGTGGAGGAAATTTCTTCTGAAGCTCAAGATGCTCATTGCATTCCCTTTGGAGGGTGTTCGCAAGGGAAGCGTTCTCACAATGAAGTTGCGGGGCCGGATATCTGATCAACTCAAGAGTCCTTTCTCTCAAGGACTATCTCTACCTCAAATTTGTGAGAACTTTTCAAAAGCAGCATATGATCCTCGTATTTCTGGTATCTATCTCCATATTGATAATTTGAATTGTGGATGGGGTAAAGTTGAAGAAATTCGAAGGCAAATATTGAATTTCAAAAGATCTGGAAAAATTGTTGTGGCTTATGTCCCTTCATGCCGAGAAAAAGAATATTATCTTGCATGTGCATGTGAAGAAATATATGCCCCTCCAAGTGCTTATTTTTCGTTGTTTGGTTTCACTGTTCAAGCATCATTCGTCAGAGGCGTTTTAGATAACATAGGGATTGAACCTCAAGTTGAAAAGATTGGGAAATACAAAAGTGCAGGGGATCAGCTAACCCGTAGAACCATGTCTGAAGAAACTTGTGAGATGATGACTACACTGCTTGACAATATTTATACAAATTGGCTGGATAAAGTCTCTTCTTCAAGAGGAAAAAGAAGAGAAGAGATTGAGAATTTCATAAATGAAGGAGTCTTTCAAGTATACAGGTTGAAAGAAGAAGGCTTCATTACGAACATAATGTATGAGGATGAGGTTATTGCTAGGTTGAAGGAGAGATTTGGATTGAAAACAAATGAAAGTCTGCGTATGGTGGATTACAGGAAATACTGTAGAGTTAAGAGATGGACTGTTGGAATATCAGGTGGTAAAGACCTGATAGCCATCATACGAGCCTCTGGGAGCATTAGTCGTGTCAAGGGTCCATTGAGTGCGTCTAGATCGGGTATTATTGCTGAGCAGTTCATTGAGAAGATTCGCAAAGTAAGAGTGTCTAAACAATATAAGGCTGCTATTATCCGAATTGACAGTCCTGGTGGTGATGCCCTTGCTTCTGATTTGATGTGGAGAGAAATCAGACTTTTGGCTGCCTTGAAACCAGTCATCGCCTCATTGTCTGATGTTGCTGCAAGTGGAGGTTACTACATGGCGATGGGAGCTGGGACTATTGTAGCAGAAAGTCTTACCTTAACTGGATCAATTGGAGTGGTCACAGGAAAATTTAACTTGGGGAAATTGTATGAGAAGGTTGGCTTCAACAAGGAAATTATATCAAGGGGAAAATATGCTGAGGTCCTTGCTGCTGAACAACGTCCTTTTAGACCAGACGAAGCAGATCTATTTGCCAAGTCTGCACAGCATATATATAATCAGTTTCGAGATAAGGCAGCTTTCTCTAGATCAATGACTGTAGAAAGCATGGAGGAGGTTGCACAGGGGAGAGTTTGGACTGGTAAAGACGCGGCTTCACACGGTTTAGTTGATGCTATTGGCGGGCTTTCTCGAGCTATTGCCATAGCAAAATTGAAGGCTAATATACCTCAAGACAAACAGGTTACTCTTGTGGAACTTTCCCGACCTTCTCTTCCAGAGATTTTAAGTGGCGCAGGGAATGCCCTAGTTGAAGTGGATAATACATTGAAGGAACTGCTTCAGGACTTGAGATTTTCTGATGGAGTTCAAGCCCGGATGGATGGAATCATGCTTGAGAGATTGGAAGGATATGCCCACCCCAACCCCATTTTGAGGCTGATGAAGGAGTTCCTTGGTTCCCTGTAG 2289 0.4426 MYEGIEVRKTKICVTTAASASFSNTNTDLTIAMALIFLVSFPPMAVVKGRSLRTTVAPQETHSDDQHRSVIAEMWKLLLHSSRRSSIRRSVAFVETLSSPSSFSAPLPHFPFQCTPDLSLPSHSQSFPPFQPLAFLSLVAFHSSSSSFDSKSKQELAGKDSGPEGGINNRSAIFADEDYPTGDFDFVPVTGWRKFLLKLKMLIAFPLEGVRKGSVLTMKLRGRISDQLKSPFSQGLSLPQICENFSKAAYDPRISGIYLHIDNLNCGWGKVEEIRRQILNFKRSGKIVVAYVPSCREKEYYLACACEEIYAPPSAYFSLFGFTVQASFVRGVLDNIGIEPQVEKIGKYKSAGDQLTRRTMSEETCEMMTTLLDNIYTNWLDKVSSSRGKRREEIENFINEGVFQVYRLKEEGFITNIMYEDEVIARLKERFGLKTNESLRMVDYRKYCRVKRWTVGISGGKDLIAIIRASGSISRVKGPLSASRSGIIAEQFIEKIRKVRVSKQYKAAIIRIDSPGGDALASDLMWREIRLLAALKPVIASLSDVAASGGYYMAMGAGTIVAESLTLTGSIGVVTGKFNLGKLYEKVGFNKEIISRGKYAEVLAAEQRPFRPDEADLFAKSAQHIYNQFRDKAAFSRSMTVESMEEVAQGRVWTGKDAASHGLVDAIGGLSRAIAIAKLKANIPQDKQVTLVELSRPSLPEILSGAGNALVEVDNTLKELLQDLRFSDGVQARMDGIMLERLEGYAHPNPILRLMKEFLGSL 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1903 762 Gene3D - 354 449 - -
Lele24g1903 762 Gene3D - 213 353 - -
Lele24g1903 762 TIGRFAM SppA_dom: signal peptide peptidase SppA, 36K type 464 677 IPR004635 GO:0006508|GO:0008233
Lele24g1903 762 SUPERFAMILY ClpP/crotonase 210 420 IPR029045 -
Lele24g1903 762 Gene3D - 459 608 - -
Lele24g1903 762 CDD S49_Sppa_N_C 464 678 IPR002142 GO:0006508|GO:0008233
Lele24g1903 762 PANTHER PROTEASE 4 175 760 - -
Lele24g1903 762 Gene3D - 609 729 - -
Lele24g1903 762 Pfam Peptidase family S49 533 682 IPR002142 GO:0006508|GO:0008233
Lele24g1903 762 Pfam Peptidase family S49 281 433 IPR002142 GO:0006508|GO:0008233
Lele24g1903 762 CDD S49_SppA_67K_type 216 429 - -
Lele24g1903 762 SUPERFAMILY ClpP/crotonase 460 669 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1903 Lele-ChrLele24 23746423 23754716 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1903 24 23746423 23754716 Lele24g1903 24 23746423 23754716 ECH
Lele22g1952 22 24185388 24193084 Lele24g1903 24 23746423 23754716 hybridization