Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1952 ATGTGGAAGCTGCTTCTACACAGCTCTCGTAGCAGCTCCATTCGGCGTTCCGGGGCATTTGTCGCAACTCTGTCCTCTTCTTCATCCTTTTCTGCTCCTCTTCCTCATTTCCCATTTCAATGCACCCCCCATCTCTCTCTTCCGTCTCATTCCCAATCTTTCCCACCCTCTCAGCCCCCCGCTTTCCTGTCACTCGTTGCCTTCCATTCTTCGTCCTCTTCTTTCGACTCAAAATCGAAACAAGAGTTGGCTGGCAAGGATTCCAGGCTTGACGGTGGCATCAAGAATCCTAGTGCCAGATTTGCCGGCGAGGACTATCCGACTGGCGACTTTGACTTTGTGCCCATTACTGGGTGGAGGAAATTTCTTCTGAAGCTCAAGATGCTCATTGCATTCCCTTTGGAGGGTGTTCGCAAGGGAAGCGTTCTCACAATGAAGTTGCGGGGCCGGATATCTGATCAACTCAAGAGTCCTTTCTCTCAAGGACTATCTCTACCTCAAATTTGTGAGAACTTTTCAAAAGCAGCATATGATCCTCGTATTTCTGGTATCTATCTCCATATTGATAATTTGAATTGTGGATGGGGTAAAGTTGAAGAAATTCGAAGGCAAATATTGAATTTCAAAAGATCTGGAAAAATTGCTGTGGCTTATGTCCCTTCATGCCGAGAAAAAGAATATTATCTTGCATGTGCATGTGAAGAAATATATGCCCCTCCAAGTGCTTATTTTTCGTTGTTTGGTTTCACTGTTCAAGCATCATTCGTCAGAGGTGTTTTAGATTACATAGGGATTGAACCTCAAGTTGAAAAGATTGGGAAATACAAAAGTGCAGGGGATCAGCTAACCCGTAGAACCATGTCTGAAGAAACTTGTGAGATGATGACTGCACTGCTTGACAATATTTATACAAATTGGCTGGATAAAGTCTCTTCTTCAAGAGGAAAAAGAAGAGAAGAGATTGAGAATTTCATAAATGAAGGAGTCTATCAAGTAGACAGGTTGAAAGAAGAAGGCTTCATTACGAACATAATGTATGAGGATGAGGTTATTGCTAGGTTGAAGGAGAGATTTGGATTGAAAACAAATGAAAGTCTGCGTATGGTGGATTACAGGAAATACTGTAGAGTTAAGAGATGGACTGTTGGAATATCAGGTGGTAAAGACCTGATAGCCATCATACGAGCCTCTGGGAGCATTAGTCGTGTCAAGGGTCCATTGAGTGCGTCTAGATCGGGTATTATTGCTGAGCAGTTCATTGAGAAGATTCGCAAAGTAAGAGTGTCTAAACAATATAAGGCTGCTATTATCCGAATTGACAGTCCTGGTGGTGATGCCCTTGCTTCTGATTTGATGTGGAGAGAAATCAGACTTTTGGCTGCCTTGAAACCTGTCATCGCCTCATTGTCTGATGTTTCTGCAAGTGGAGGTTACTACATGGCGATGGGAGCTGGGACTATTGTAGCAGAAAGTCTTACCTTAACTGGATCAATTGGAGTGGTCACAGGAAAATTTAACTTGGGGAAACTGTATGAGAAGGTTGGCTTCAACAAGGAAATTATATCAAGGGGAAAATATGCTGAGGTCCTTGCTGCTGAACAACGTCCTTTTAGACCAGACGAAGCAGAGCTATTTGCCAAGTCTGCACAGCATATTTATAATCAGTTTCGAGATAAGGCGGCTTTCTCTAGATCAATGACTGTAGAAAGCATGGAGGAGGTTGCACAGGGGAGAGTTTGGACTGGTAAAGACGCAGCTTCACACGGTTTAGTCGATGCTATTGGGGGGCTTTCCCGAGCTATTGCCATAGCAAAATTGAAGGCTAATATACCTCAAGACAAACAGGTTACTCTTGTGGAACTTTCCCGACCTTCTCTTCCAGAGATTTTAAGTGGCGCAGGGAATGCCCTAGTTGAAGTGGATAATACATTGAAGGAACTGCTTCAGGACTTGAGATTTTCTGACGGAGTTCAAGCCCGGATGGATGGAATCATGCTTGAGAGATTGGAAGGATATGCCCACCCCAACCCCATGTTGAGGCTGATGAAGGAGTTCCTTGGTTCCCTGTAG 2070 0.4396 MWKLLLHSSRSSSIRRSGAFVATLSSSSSFSAPLPHFPFQCTPHLSLPSHSQSFPPSQPPAFLSLVAFHSSSSSFDSKSKQELAGKDSRLDGGIKNPSARFAGEDYPTGDFDFVPITGWRKFLLKLKMLIAFPLEGVRKGSVLTMKLRGRISDQLKSPFSQGLSLPQICENFSKAAYDPRISGIYLHIDNLNCGWGKVEEIRRQILNFKRSGKIAVAYVPSCREKEYYLACACEEIYAPPSAYFSLFGFTVQASFVRGVLDYIGIEPQVEKIGKYKSAGDQLTRRTMSEETCEMMTALLDNIYTNWLDKVSSSRGKRREEIENFINEGVYQVDRLKEEGFITNIMYEDEVIARLKERFGLKTNESLRMVDYRKYCRVKRWTVGISGGKDLIAIIRASGSISRVKGPLSASRSGIIAEQFIEKIRKVRVSKQYKAAIIRIDSPGGDALASDLMWREIRLLAALKPVIASLSDVSASGGYYMAMGAGTIVAESLTLTGSIGVVTGKFNLGKLYEKVGFNKEIISRGKYAEVLAAEQRPFRPDEAELFAKSAQHIYNQFRDKAAFSRSMTVESMEEVAQGRVWTGKDAASHGLVDAIGGLSRAIAIAKLKANIPQDKQVTLVELSRPSLPEILSGAGNALVEVDNTLKELLQDLRFSDGVQARMDGIMLERLEGYAHPNPMLRLMKEFLGSL 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1952 689 Gene3D - 249 315 - -
Lele22g1952 689 CDD S49_Sppa_N_C 391 605 IPR002142 GO:0006508|GO:0008233
Lele22g1952 689 SUPERFAMILY ClpP/crotonase 137 347 IPR029045 -
Lele22g1952 689 SUPERFAMILY ClpP/crotonase 387 596 IPR029045 -
Lele22g1952 689 CDD S49_SppA_67K_type 143 356 - -
Lele22g1952 689 PANTHER PROTEASE 4 100 687 - -
Lele22g1952 689 Pfam Peptidase family S49 460 609 IPR002142 GO:0006508|GO:0008233
Lele22g1952 689 Pfam Peptidase family S49 208 360 IPR002142 GO:0006508|GO:0008233
Lele22g1952 689 Gene3D - 135 381 - -
Lele22g1952 689 Gene3D - 386 531 - -
Lele22g1952 689 MobiDBLite consensus disorder prediction 75 96 - -
Lele22g1952 689 Gene3D - 532 656 - -
Lele22g1952 689 TIGRFAM SppA_dom: signal peptide peptidase SppA, 36K type 391 604 IPR004635 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1952 Lele-ChrLele22 24185388 24193084 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1952 22 24185388 24193084 Lele22g1952 22 24185388 24193084 ECH
Lele22g1952 22 24185388 24193084 Lele24g1903 24 23746423 23754716 hybridization