Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1812 ATGTCAGAGAAGAGCATGGTTCCTTCAAGATTTATATTTTGTGTAATTGTGGTTTCTATGTTCCTTTTGGTCTTGTCTTCGATTTTCCTCCTTCAGTTTAGAGATCATTCGTTCATACCTAGATCAGTGTTTGAGCTTATTCTGGTCAATAACACATCATTTTACATCAATCCCAATGTCAAGAAGGAAGACAAAAAAATTCAAGCTCAAAGGCCTGGGGAATCGGACTGTCAAGTTTACAAATCAAGCCAAAAACTGAGCTCTATAGAACAACAGAGAATTAAGGCATGTGTTCCTACTGGGGCACTTTTGAGAGTGTTCATGTATGACTTGCCTCCTGAATTTCACTTTGGGATATTGGGTTGGAAGGGAAGTGAAAACCAAACATGGCCATGGGTCAATGACCCGAAACTAGTCCCATCATATCCTGGTGGACTAAATTTACAGCACAGTCCAGAATACTGGCTCACCCTTGATCTCCTGTCATCAAATTCTGCAGAAGTTGTAAGACCTTGTACTGCAGTTAGAGTGCAGAATTCAAGTCAAGCGGATGTAATTTTTGTTCCATTTTTCTCATCTCTGAGTTACAACCGGCTCTCTAAGACTCAAGGGGATGAGAAAGTTAGCGTGAATGAAATGTTGCAAGAAAAGTTGGTACAGTTTCTTATGAACAGGGAAGAATGGAAACGTTCAGGAGGGAAAGATCATCTTATTGTAGCTCACCATCCTAATAGCATGCTGGATGCAAGAAAAAAGCTGGGTTCTGCCATTCTTGTTCTTGCAGATTTCGGAAGGTATCCGGTTGAAATAGCGAATGTAAAGAAAGATATTATAGCACCCTATAAACATGTAGTAAGTACCATGCCAAGAGCCGAATCATTTTCCTATAAGGAGCGTCCTACTCTCTTGTATTTCCAAGGGGCAATATACAGGAAAGATGGAGGAATTATTCGCCAAGAACTGTATTATCTTCTCAAAGATGAGAAAGATGTCCATTTTGCATTTGGAACGGTACGAAGAAATGGGGTACGTGAGGCGAGTCATGGAATGGCCTTATCTAAATTCTGCCTAAACATTGCTGGGGATACCCCATCCTCCAATCGTCTCTTTGATGCCATAGCTAGCCACTGTGTTCCTGTGATTATTAGTGACAAAATTGAGCTACCATTTGAAGATACCTTGGACTACTCAGAATTCTGCTTATTTGTTAGCGCCAAGGATGCTGTGAGGAAAGGCTATCTGCTGAATCTGCTTAAATCAATCACACAGAAGAGGTGGACTGAGATGTGGAAAAGATTGAAAGAGATTACACTGCACTTTGAGTATCAATATCCATCCCAACCCGGGGATGCTGTGAATATGATTTGGCAGGAAGTCGTGCATAAGGTTTCTTACGTGCGGTTTGATTTGCACAGGAAGAACAGGTACAAGAAATCTCAGCTTTTTGTCAGGACTAACTGA 1461 0.4107 MSEKSMVPSRFIFCVIVVSMFLLVLSSIFLLQFRDHSFIPRSVFELILVNNTSFYINPNVKKEDKKIQAQRPGESDCQVYKSSQKLSSIEQQRIKACVPTGALLRVFMYDLPPEFHFGILGWKGSENQTWPWVNDPKLVPSYPGGLNLQHSPEYWLTLDLLSSNSAEVVRPCTAVRVQNSSQADVIFVPFFSSLSYNRLSKTQGDEKVSVNEMLQEKLVQFLMNREEWKRSGGKDHLIVAHHPNSMLDARKKLGSAILVLADFGRYPVEIANVKKDIIAPYKHVVSTMPRAESFSYKERPTLLYFQGAIYRKDGGIIRQELYYLLKDEKDVHFAFGTVRRNGVREASHGMALSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDKIELPFEDTLDYSEFCLFVSAKDAVRKGYLLNLLKSITQKRWTEMWKRLKEITLHFEYQYPSQPGDAVNMIWQEVVHKVSYVRFDLHRKNRYKKSQLFVRTN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1812 486 Pfam Exostosin family 104 416 IPR040911 -
Lele24g1812 486 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 21 457 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1812 Lele-ChrLele24 23184287 23185955 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1812 24 23184287 23185955 Lele24g1812 24 23184287 23185955 ECH
Lele21g1896 21 26270135 26272015 Lele24g1812 24 23184287 23185955 hybridization
Lele22g1865 22 23574885 23576553 Lele24g1812 24 23184287 23185955 hybridization