Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1896 ATGTCAGAGAAGAGCATGGTTCCATCAAGATTTATATTTTGTGTAATTGTGGTTTCTATGTTCCTTTTGGTCTTGTCTTCGATTTTCCTCCTTCAGTTTAGAGATCATTCGTTCATACCTAGATCAGTATTTGAGCTTATTCTGGTCAATAACACATCATTTTACATCAATCCCAATATCAAGAAGGAAGACAAAAAAATTCAAGCTCAAAGGCCCGGGGAATCGGACTGTCAAGTTTTCAAATCAAGCCACAAACTGAGCTCTATAGAACAACAGAGAATTAAAGCATGTGATCCTACTGGGGCACTTTTGAGAGTGTTCATGTATGACTTGCCTCCTGAATTTCACTTTGGGATATTGGGTTGGAAGGGAAGTGAAAACCAAACATGGCCACTGGTGGATGACCCGAAACTTGTCCCATCATATCCTGGTGGACTAAATTTACAGCACAGTCCAGAATACTGGCTCACCCTTGATCTCCTGTCATCAAATTCTGCAGAAATTGTCAGACCTTGTACTGCAGTTAGAGTGCAGAATTCAAGCCAAGCAGATGTAATTTTTGTTCCATTCTTCTCATCTCTGGGTTACAACCGGCTCTCTAAGATTCAAGGGGATGAGAAAGTTAGCACGAATGGAATGTTGCAAGAAAAGTTGGTACATTTTCTTATGAGCAGGGAAGAATGGAAACGTTCAGGAGGGAAAGATCATCTCATTGTAGCTCACCATCCTAATAGCATGCTGGATGCAAGAAAAAAGCTGGGTTCTGCCATTCTTGTTCTTGCAGATTTTGGAAGGTATCCCGTTGAAATAGCGAATATAAAGAAAGATATTATAGCACCCTATAAACATGTAGTAAGTACCATGCCAAGAGCTGAATCATTTTCATATAAGGAGCGTCCTACTCTCTTATATTTCCAAGGGGCAATATACAGGAAAGATGAAGGAATTATTCGCCAAGAACTGTATTATCTTCTCAAAGGTGAGAAAGATGTCCATTTTGCATTTGGAACGGTACAAAGAAATGGGGTACGTGAGGCAAGTCATGGAATGGCCTTATCTAAATTCTGCCTAAACATTGCTGGAGATACCCCATCCTCCAATCGTCTCTTTGATGCCATAGCTAGCCACTGTGTTCCTGTGATTATTAGTGACAAAATTGAGCTACCATTCGAAGATACCCTGGACTACTCAGACTTCTGCTTATTCGTCCGCGCCAAGGATGCTGTGAGGAAGGGCTATCTGCTGAATCTGCTTAGATCAATCACGCAGAAGAGGTGGACTGAGATGTGGGAAAGATTGAAGGAGATTACATTGCACTTTGAGTATCAATATCCATCCCAACCTGGGGATGCTGTGAATATGATTTGGCAGGAAGTCGCGCATAAGGTTTCTCCCACACGGTTTGATTTACACAGGAAGAACAGATACAAGAAATCTCAGCTTCTTGTCAGGGCTAATTGA 1461 0.4141 MSEKSMVPSRFIFCVIVVSMFLLVLSSIFLLQFRDHSFIPRSVFELILVNNTSFYINPNIKKEDKKIQAQRPGESDCQVFKSSHKLSSIEQQRIKACDPTGALLRVFMYDLPPEFHFGILGWKGSENQTWPLVDDPKLVPSYPGGLNLQHSPEYWLTLDLLSSNSAEIVRPCTAVRVQNSSQADVIFVPFFSSLGYNRLSKIQGDEKVSTNGMLQEKLVHFLMSREEWKRSGGKDHLIVAHHPNSMLDARKKLGSAILVLADFGRYPVEIANIKKDIIAPYKHVVSTMPRAESFSYKERPTLLYFQGAIYRKDEGIIRQELYYLLKGEKDVHFAFGTVQRNGVREASHGMALSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDKIELPFEDTLDYSDFCLFVRAKDAVRKGYLLNLLRSITQKRWTEMWERLKEITLHFEYQYPSQPGDAVNMIWQEVAHKVSPTRFDLHRKNRYKKSQLLVRAN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1896 486 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 21 457 IPR004263 GO:0006486|GO:0016757
Lele21g1896 486 Pfam Exostosin family 104 416 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1896 Lele-ChrLele21 26270135 26272015 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1896 21 26270135 26272015 Lele21g1896 21 26270135 26272015 ECH
Lele21g1896 21 26270135 26272015 Lele23g0117 23 748449 750329 hybridization
Lele21g1896 21 26270135 26272015 Lele24g1812 24 23184287 23185955 hybridization