Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1788 ATGGATCACCAATGGCGTTCCAGACCAATCCAAGGTAATGTTTGCCCCGTCTGCTCAACCCGTCACTTACCTTTTTGTCCTCCACCCCTCCCATATTATACACCTTCTAGATTTCCATTCGAAGGCGATCCCTCCTTTCAGAGATCAGCCTATCCAGGACCTCCCGGAATGCATGGGTCCTATGTTGCAAACTGTAATGATGGGTTCGCTGATCCCAGTTTCTGGCATAGAAACCCTAATTGGGATAAACCTTTACCTGGGCAACCGCCCTTCCAGTACCCTAGGGACAGTTTTAGGCCGCCACTATATGAACATGGCGCTCCTAACGATTACGTCGGTGAGGATGATAGAAATTTCAAGAGGCCGAGGGTGGGAGATGATAGTTCCGGTTCTGCCACTTTCTCAAATGATTTTGATAAAAACCCTGCTAGAAACGTGTCAGAGGATGAGCGAAGATTAAAGTTAATTCGTGATCATGGGGTTGCTCTTAGCAAACCGCCTGAAGAGCAGAGTTTTGGCGGCCCTGGGGGACTTAACGAGAACGGGTTTCATTCGGACGTAAATCAAGTGGTATTTCGCAGGGATGACAAAGATGTGGTTCCACATTCTCAGAATGGTGGATTTTTGCCTTTCCAACACGGTCAACTCGGAACTTCTCAGCAGCATATGTCTTGGCATCAGGCTAATGATGCTGGGGTGGCACATGGACCTGGTTACTCTCTTAGGGATGGTTGGCAAGGGATTACTGCACCTTATCCTGAGCAGACTGCTAATGGTGATCCTAACAAACTGCTACCACAATCTTATGGAGCACAGAAACATGTTCAAGTCAGACATGAGTTTAACTTTCCTCCTCAGGAGGAAAATCAAACACAAGTTGGACGACAAGATATATCCGGAGTGTCTCAACGTGGTACATCTAATTTGAATGGAAGAAGTTTCTACGGTACCCATTCTTACACTCCTGGTAGCAGCAATTTTCCCGAGAATAGGAGTCCAATGGAGGCTTCAAGGATCTTTCATGGTCAACCTCCTCTTCCTTCTTCCCCACCACCTCCTCTTCCGTTGGAACCACCAATGAACCAACCTAAGGCGCTTGCTTCTCTTTTCCCTGTTTCTGTTAGTTCCTCAGCTGTGGCTTCTTCACCATATCCCATAATTTCTGAAGCTCACTCTTTGCCTCAACCCAACTTTCACTACAAATCTCTTCCACGTTCTTCTGCTGGTTTTCCCTTTGAGGAACCTTCTAAGCAGTTTTTGGGAGATTCCAAACCCTTTTCACTAAAGCAATTTTCTGATGATAAACCCAAGTTTATCAATGCGTCCCACTTATTTAAGCCCCCGAATCGAACTACTCGGCCTGATCACATTGTAATAATTCTTCGAGGTCTTCCTGGTAGCGGGAAAAGTTACTTGGCAAAGATGTTGCGTGATCTTGAGGTTGAAAGTAGTGGTGATGCTCCACGAATTCATTCTATGGATGATTATTTTATGACTGAAGTTGAAAAGGTTGATGATAATGATGCTTCAAAATCTTCAAGTTCTGGCAGAGGCAAGAAGCCTGTAATGAAGAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCTTACCGGTCAAGCATGTTGAAGGCGTTCAAGAAGAATGTTGAGGAGGGAGCTTTTACCTTTATAATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGAGATCGGGTTATGAAGTTTACATTTTAGAAGCTACTTACAAGGACCCTGCGGGCTGTGCTGCCAGAAATGTGCACGGATTTACTCAAGAGGACATAGAAAAGATGGCTGGGCAATGGGAAGAAGCTCCATCCTTGTACCTGCAGCTTGATGTAAAGTCATTATTCCATGGTGATGATTTGAGGGAAAGCAAAATTCTGGAGGTAGATATGGATATGGAAGATGATATAGGGGACGCCTTACCTGTGGTGCAAGTGAAAGAGGATGAGAAAATTGTTGACTCTTATGTCAGAGATGATACTAATGATGGTTCCTCACTGGAAGGGAAGAGATGGGATGCCGAAGAAGAACATCCAGCAGAGGTCAGGGAATTAGGCAAGAGCAAATGGTCAGAAGAGTTTGATGAAGATGAGAATGATCGAACTGAAAGGGCGAAGGGCAACATTAGTGCTCTTTCTGGGTTAATTCATGCATATGGCAAGGAAGGAAAATCTGTACATTGGGCTGATCAGGTTGGCCATAGAGGGTTTTCAATAGGTGCCACAAAGAAGGCAAATGTTTCTTCTTTAGTGATTGGACCTGGTGCTGGGTACAATCTGAAATCAAATCCTTTAACTGAAGAGGAGAGTGCAACAACCCATAACAGTGCAGAGACAAAGAAGTACGGCGTATTCCAAGAAAGAATCCGGGCTGAGCGTGAATCCTTCAAAGCTGTATTTGACAGGAGACGGCAACGGATCGGTGGACTTGATGTTGATGAGGACTGA 2502 0.4508 MDHQWRSRPIQGNVCPVCSTRHLPFCPPPLPYYTPSRFPFEGDPSFQRSAYPGPPGMHGSYVANCNDGFADPSFWHRNPNWDKPLPGQPPFQYPRDSFRPPLYEHGAPNDYVGEDDRNFKRPRVGDDSSGSATFSNDFDKNPARNVSEDERRLKLIRDHGVALSKPPEEQSFGGPGGLNENGFHSDVNQVVFRRDDKDVVPHSQNGGFLPFQHGQLGTSQQHMSWHQANDAGVAHGPGYSLRDGWQGITAPYPEQTANGDPNKLLPQSYGAQKHVQVRHEFNFPPQEENQTQVGRQDISGVSQRGTSNLNGRSFYGTHSYTPGSSNFPENRSPMEASRIFHGQPPLPSSPPPPLPLEPPMNQPKALASLFPVSVSSSAVASSPYPIISEAHSLPQPNFHYKSLPRSSAGFPFEEPSKQFLGDSKPFSLKQFSDDKPKFINASHLFKPPNRTTRPDHIVIILRGLPGSGKSYLAKMLRDLEVESSGDAPRIHSMDDYFMTEVEKVDDNDASKSSSSGRGKKPVMKKVMEYCYEPEMEEAYRSSMLKAFKKNVEEGAFTFIIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPAGCAARNVHGFTQEDIEKMAGQWEEAPSLYLQLDVKSLFHGDDLRESKILEVDMDMEDDIGDALPVVQVKEDEKIVDSYVRDDTNDGSSLEGKRWDAEEEHPAEVRELGKSKWSEEFDEDENDRTERAKGNISALSGLIHAYGKEGKSVHWADQVGHRGFSIGATKKANVSSLVIGPGAGYNLKSNPLTEEESATTHNSAETKKYGVFQERIRAERESFKAVFDRRRQRIGGLDVDED 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1788 833 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 399 821 IPR026314 GO:0005634
Lele24g1788 833 MobiDBLite consensus disorder prediction 676 722 - -
Lele24g1788 833 MobiDBLite consensus disorder prediction 109 124 - -
Lele24g1788 833 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 456 629 IPR027417 -
Lele24g1788 833 MobiDBLite consensus disorder prediction 284 332 - -
Lele24g1788 833 FunFam YLP motif-containing protein 1 isoform X3 457 622 - -
Lele24g1788 833 MobiDBLite consensus disorder prediction 337 356 - -
Lele24g1788 833 Gene3D - 457 623 IPR027417 -
Lele24g1788 833 MobiDBLite consensus disorder prediction 80 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1788 Lele-ChrLele24 22989908 22997719 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1788 24 22989908 22997719 Lele24g1788 24 22989908 22997719 ECH
Lele21g1860 21 26039911 26047647 Lele24g1788 24 22989908 22997719 hybridization
Lele22g1834 22 23348664 23356505 Lele24g1788 24 22989908 22997719 hybridization