LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele22g1834	ATGGATCACCAATGGCGTTCCAGACCAATCCAAGGTAATGTTTGCCCTGTCTGCTCAACCCGTCACTTACCTTTTTGTCCTCCACCCCTCCCATATTATCCACCTTCTAGATTTCCATTCGAAGGCGATCCCTCCTTTCAGAGATCAGCCTATCCAGGACCTCCCGGAATGCACGGGTCCTATGTTGCTAACAGTAATGATGGGTTCGCTGATCCCAGTCTCTGGCATAGAAACCCTAATTGGGATAAACCTTTACCTGGGCAACCGCCCTTCCAGTACCCTAGGGACAGTCTTAGGCCGCCACTATATGAACATAGCGCTCCTAACGATTACGTCGGTGAGGGTGATAGAAATTTCAAGAGGCCGAGGGTGGGAGATGATAGTTCTGGTTCTGCCACTTTCTCAAATGATTTTGATAAAAACCCTGCTAGAAACGTGTTGGAGGATGAGCGAAGATTGAAGTTAATTCGTGATCATGGGGTTGCTCTTAGCAAACCGCCTGAAGAGCAGAGTTTTGGCGGACCTGGGGGACTTAACCAGAACGGGTTTCATTCGGACGTAAATCAAGGTGTATTTCGCAGGGATGACAAAGATGTGGTTCCACATTCTCAGAATGGTGGATTTTTGCCATTCCAACACGGTCAACTCGGAACTTCTCAGCAGCATATGTCTTGGCATCAGGCTAATGATGCTGGGGTAGCACATGGACCTGGTTACTCTCTTAGGGATGGTTGGCAAGGGATTACTGCACCTTATCCCGAGCAGACTGCTAATGGTGATCCTAACAATCTGCTACCACAATCTTATGGAGCACAGAAACATGTTCAAGTCAGACATGAGTTTAACTATCCGCCTCAGGAGGAAAATCAAACACAAGTTGGACGACAAGATATATCCGGAGTGTCTCAACGTGGTGCATCTAATTTGAATGGAAGAAGTTTCTATGGTACCCATTCTTACGCTCCTGGTAGCAGCAATTTTCCCAAGAATAGGAGTCCAATGGAGGCTTCAAGGATCTTTCATGGTCAACCTCCTCTTCCTTCTTCCCCACCACCTCCTCTTCCGTTGGAGCCACCAATGAACCAACCTAAGGCGCCCGCTTCTCTTTTACCTGTTTCTGTTAGTTCCTCAGCTGTGGCTTCTTCACCATATCCCATAATTTCTGAAGCTCACTCTTTGCCTCAACCCAACTTTCACTACAAATCTCTTCCACGTTCTTCTGCTGGTTTTCCCTTTGAGGAACCTTCTAAGCAGTTTTTGGGAGATTCCAAACCCTTTTCACTAAAGCAATTTTCTGATGATAAACCCAAGTTTATCAATGCGTCCCACTTATTTAAGCACCCGCTTCGAACTACTCGGCCTGATCACATTGTAATAATTCTTCGAGGTCTTCCTGGTAGCGGGAAAAGTTACTTGGCAAAGATGTTGCGTGATCTTGAGGTTGAAAATGGTGGTGATGCTCCACGAATTCATTCTATGGATGATTATTTTATGACTGAAGTTGAAAAGGTTGATGATAATGATGCTTCAAAATCTTCAAGTTCTTGCAGAGGCAAGAAGCCTGTAATGAAGAAGTTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCTTACCGGTCAAGCATGTTGAAGGCATTCAAGAAGAATGTTGAGGAGGGAGCTTTTACCTTTATAATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGAGATCGGGTTATGAAGTTTACATTTTAGAAGCTACTTACAAGGACCCTGCGGGCTGTGCTGCCAGAAATGTGCACGGATTTACTCAAGAGGACATAGAAAAGATGGCTGGGCAATGGGAAGAAGCTCCATCCTTGTACCTGCAGCTTGATGTAAAGTCATTATTCCATGGTGATGATTTGAGGGAAAGCAGAATTCTGGAGGTAGATATGGATATGGAAGATGATATCGGTGACGACTTACCCGTGGTGCAAGGAAAAGAGGATGAGAAAATTGTTGACTCTTATGTCAGAGATGATGCTAACGATGGTTCCTCACTGGAAGGGAAGAGATGGGATGCCGAAGAAGCAGAGGTCAGGGAATTAGGCAAGAGCAAATGGTCAGAAGAGTTGGATGAAGATGAGAATGATCGAACTGAAAGGGGGAAGGGCAACGTTAGTGCTCTTTCTGGGTTAATTCATGCATATGGCAAGGAAGGAAAATCTGTGCATTGGGCTGATCAGGTGGGCAATAGAGGGTTTTCAATAGGCGCTACAAAGAAGGCAAATGTTTCATCTTTAGTGATTGGACCTGGTGCTGGGTACAATCTGAAAACAAATCCTTTAACTGAAGAGGAGAGTGCAACAACCCATAACAGTGCAGAGACAAAGAAGTACAGCGTATTCCAAGAAAGAATCCGGGCTGAGCGTGAATCCTTCAAAGCTGTATTTGACAGGAGACGGCAACGGATCAGTGGACTTGATGATGATGAGGACTGA	2493	0.4533	MDHQWRSRPIQGNVCPVCSTRHLPFCPPPLPYYPPSRFPFEGDPSFQRSAYPGPPGMHGSYVANSNDGFADPSLWHRNPNWDKPLPGQPPFQYPRDSLRPPLYEHSAPNDYVGEGDRNFKRPRVGDDSSGSATFSNDFDKNPARNVLEDERRLKLIRDHGVALSKPPEEQSFGGPGGLNQNGFHSDVNQGVFRRDDKDVVPHSQNGGFLPFQHGQLGTSQQHMSWHQANDAGVAHGPGYSLRDGWQGITAPYPEQTANGDPNNLLPQSYGAQKHVQVRHEFNYPPQEENQTQVGRQDISGVSQRGASNLNGRSFYGTHSYAPGSSNFPKNRSPMEASRIFHGQPPLPSSPPPPLPLEPPMNQPKAPASLLPVSVSSSAVASSPYPIISEAHSLPQPNFHYKSLPRSSAGFPFEEPSKQFLGDSKPFSLKQFSDDKPKFINASHLFKHPLRTTRPDHIVIILRGLPGSGKSYLAKMLRDLEVENGGDAPRIHSMDDYFMTEVEKVDDNDASKSSSSCRGKKPVMKKFMEYCYEPEMEEAYRSSMLKAFKKNVEEGAFTFIIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPAGCAARNVHGFTQEDIEKMAGQWEEAPSLYLQLDVKSLFHGDDLRESRILEVDMDMEDDIGDDLPVVQGKEDEKIVDSYVRDDANDGSSLEGKRWDAEEAEVRELGKSKWSEELDEDENDRTERGKGNVSALSGLIHAYGKEGKSVHWADQVGNRGFSIGATKKANVSSLVIGPGAGYNLKTNPLTEEESATTHNSAETKKYSVFQERIRAERESFKAVFDRRRQRISGLDDDED	830

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele22g1834	830	MobiDBLite	consensus disorder prediction	344	365	-	-
	Lele22g1834	830	MobiDBLite	consensus disorder prediction	284	368	-	-
	Lele22g1834	830	MobiDBLite	consensus disorder prediction	284	332	-	-
	Lele22g1834	830	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	456	628	IPR027417	-
	Lele22g1834	830	MobiDBLite	consensus disorder prediction	110	124	-	-
	Lele22g1834	830	MobiDBLite	consensus disorder prediction	701	720	-	-
	Lele22g1834	830	MobiDBLite	consensus disorder prediction	80	145	-	-
	Lele22g1834	830	Gene3D	-	457	623	IPR027417	-
	Lele22g1834	830	PANTHER	YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP	413	818	IPR026314	GO:0005634
	Lele22g1834	830	MobiDBLite	consensus disorder prediction	701	722	-	-
	Lele22g1834	830	FunFam	YLP motif-containing protein 1 isoform X3	457	622	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele22g1834	Lele-ChrLele22	23348664	23356505	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele22g1834	22	23348664	23356505	Lele22g1834	22	23348664	23356505	ECH
	Lele22g1834	22	23348664	23356505	Lele23g0150	23	964680	971704	hybridization
	Lele22g1834	22	23348664	23356505	Lele24g1788	24	22989908	22997719	hybridization