Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1637 ATGGCGAGCGCTAACTTGGAAGATGTTCCTTCTATGGATCTCATGACTGAGCTTCTCCGTCGAATGAAGTGCGCCTCCAAACCCGACAAGCGTCTCATCCTCATTGGTCCACCTGGATCAGGGAAAGGCACCCAATCACCAATCATAAAGGATGGATATTGTCTGTGCCACTTAGCTACTGGTGACATGTTAAGAGCTGCTGTAGCGGCAAAAACCCCTCTTGGCATCAAGGCTAAAGAAGCAATGGACAAGGGGGAACTTGTTTCAGACGACTTGGTTGTTGGAATTATTGATGAGGCAATGAAGAAACCATCATGTCAGAAAGGTTTCATTCTTGATGGTTTTCCTAGAACTGTGGTCCAAGCACAGAAGCTTGATGAGATGCTGGAAAGGAAAGGAGCAAAACTGGACAAGGTACTCAATTTTGCAATTGATGATGTAATCCTTGAAGAACGGATTACTGGTCGCTGGATACACCCATCTAGTGGGAGAACCTACCATACAAAATTTGCCCCATCAAAGGTTCCAGGAGTCGATGATGTCACTGGGGAACCCTTGATTCAGCGCAAGGATGACACAGCAGCTGTCTTAAAATCTAGACTGGAAGCATTTCACAGACAAACAGAACCAGTTATTGATTATTATTCAAAGAAAGGTCTTGTTGCTAACCTTCATGCAGAGAAGCCTCCTAAAGAGGTGACAACTGAGGTCGAGAAGGTGCTATCATCATAG 732 0.4508 MASANLEDVPSMDLMTELLRRMKCASKPDKRLILIGPPGSGKGTQSPIIKDGYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLERKGAKLDKVLNFAIDDVILEERITGRWIHPSSGRTYHTKFAPSKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHRQTEPVIDYYSKKGLVANLHAEKPPKEVTTEVEKVLSS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1637 243 Pfam Adenylate kinase 34 219 - -
Lele24g1637 243 TIGRFAM adk: adenylate kinase 31 241 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lele24g1637 243 Hamap Adenylate kinase [adk]. 30 242 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele24g1637 243 Pfam Adenylate kinase, active site lid 156 191 IPR007862 GO:0004017
Lele24g1637 243 CDD ADK 31 233 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele24g1637 243 PRINTS Adenylate kinase signature 33 46 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele24g1637 243 PRINTS Adenylate kinase signature 61 75 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele24g1637 243 PRINTS Adenylate kinase signature 189 204 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele24g1637 243 PRINTS Adenylate kinase signature 110 126 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele24g1637 243 PRINTS Adenylate kinase signature 206 220 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele24g1637 243 ProSitePatterns Adenylate kinase signature. 110 121 IPR033690 -
Lele24g1637 243 PANTHER NUCLEOTIDE KINASE 6 238 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele24g1637 243 Gene3D - 2 242 IPR027417 -
Lele24g1637 243 FunFam Adenylate kinase mitochondrial 30 243 - -
Lele24g1637 243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 241 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1637 Lele-ChrLele24 21928675 21931467 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1637 24 21928675 21931467 Lele24g1637 24 21928675 21931467 ECH
Lele21g1692 21 24858599 24866336 Lele24g1637 24 21928675 21931467 hybridization
Lele22g1673 22 22218127 22220945 Lele24g1637 24 21928675 21931467 hybridization