Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1692 ATGGCTCTTTACCTTCTCTACGAATCCGCTTCTGGCTACGGCCTATTCCATGCCCATGGCCTCGATGAGATTGGGCAGAACACCGAAGCGGTTCGGAACTCTGTTTCCGACTTGAACCGGTTCGGCAAGGTCGTGCAGCTTGCGGCATTTTCTCCTTTCCAATCTGCCCTTGATGCTCTCAAGCAATGCAACTCTGTTTCTGAAGGTCTGTTGACCGATGAGCTGAGAAGTTTTCTGGAGATTAATCTCCCAAAAGTTAAGGAAGGCAAGAAGGCAAAGTTCAGTTTAGGTGTAGTAGATCCTAAGATTGGTTCTCAGATCTCTGAAGTGACCAAAATTCCATGTCAAAGTAATGAGTTTGTGTGTGAGCTGCTTCGAGGTGTTCGGCTCCATTTTGATAGATTTCTCAATGATCTCAAGCCTGGAGATTTGGAAAAAGCTCAACTTGGTCTGGGGCATAGTTACAGCAGGGCAAAAGTGAAATTTAATGTTAACCGAGTTGACAATATGGTCATTCAAGCAATCTTCCTTCTTGATACGCTTGATAAAGATATCAATTCTTTTTCCATGAGAGTCAGGGAATGGTACTCGTGGCATTTTCCTGAACTGGTGAAGATTGTAAATGACAACTATCTATATGCCAGAGTTGCAAAATATATTGAAGATAAGTCAAAGCTGACTGAGGAAAAAATCCCAGGCTTAACAGACATAGTTGGGGATGAAGACAAGGCGAAGGAGATAGTGGAAGCTGCCAAAGCATCTATGGGACAGGATTTGTCTCCAGTGGACCTAATTAATGTCCAGCAGTTTGCTCAGAGGGTAATGGACCTATCTGAGTATAGGAGGAAGCTTTATGATTATCTTGTGACTAAGATGAATGATATTGCACCAAATTTGGCCTCTTTGATTGGTGAAGTTGTTGGGGCTCGTTTGATTTCACATGCCGGAAGCCTCACTAATTTGGCCAAGTGCCCCTCTTCTACTCTTCAAATTCTTGGTGCAGAGAAGGCTTTGTTCAGGGCATTGAAAACCAGAGGCAATACTCCCAAATACGGTCTGATATTCCATTCATCATTTATTGGTCGAGCTTCTGCCAAAAACAAAGGCCGAATGGCTCGCTATCTTGCAAATAAGTGTTCAATTGCATCACGCATTGACTGCTTTTCTGAAAGGGACAGTACAGCTTTTGGAGAGAAACTCCGTGAACAAGTTGAGGAGCGACTTGACTTTTATGACAAGGGAGTTGCCCCACGTAAGAATATTGATGTCATGAAGGCTGCAATGGAAAGTGCTCAAAATAAAGATGATGAGATTGCTACAGAAGCGCCTACTGAAGCATCTGGCAAGAAAGGCAAAAGGAAGGCAAAATCTGCTGATGCAAATGGAGTTGAAGAAATGGCTGTTGATAATATGCCCAACGGAGTTACAAATGGAGATGCATTAGAGGATCACAGATCAGAAAAGAAGAAGAAGGAAAAGAGGAAACTGGACGTGGACACGAATATGCAGGATGTGACCGTTCAAGATGATGCGAATAATGGCGAGGCAAATGGAGAAGTGAAGAAGAAGAAGAAGAAAGAGAAGAAAGATAATGATGGAGAAGTACAAGACGGTGCTATTAAGACCAAGAAGAAGAAGAAGAAATCCAAAACTGAGGATGATCAGTTTCATCCGGAAATCTTCGCTGAAATTGCATCAGAATATTTTTCTTTGTTCTTTCTCTCTTTCGGACGCATTCGTGATTCTGCTGCTTGGCTTTCTTTCTGCTGCAGAACATCAAAAACCGCGAGGCCAAGGAGGAGGATAACACGCAGAGGAAGCGAAATGGCGAGCGCTAACTTGGAAGATGTTCCTTCTGTGGATCTCATGACTGAGCTTCTCCGTCGAATGAAGTGCGCCTCCAAACCCGACAAGCGTCTGATCCTCATTGGTCCACCTGGATCAGGGAAAGGCACCCAATCACCAGTCATAAAGGATGAGTATTGCCTGTGCCACTTAGCTACTGGTGACATGTTAAGAGCTGCTGTAGCAGCTAAAACTCCTCTTGGCATCAAGGCCAAAGAAGCAATGGACAAGGGAGAACTTGTTTCAGACGACTTGGTTGTTGGAATTATAGATGAGGCAATGAAGAAACCATCATGTCAGAAAGGTTTCATCCTTGATGGCTTTCCTAGAACTGTGGTCCAAGCACAGAAGCTTGACGAGATGCTGGAAAGGAAAGGAGCAAAACTAGACAAGGTACTCAATTTTGCAATTGATGATGCAATCCTTGAAGAGCGGATTACTGGTCGCTGGTTACATCCCTCCAGTGGGAGAACCTACCATACAAAATTTGCCCCACCAAAGGTTCCAGGAGTTGATGATGTAACTGGGGAACCCCTGATTCAGCGCAAGGATGACACAGCAGCTGTCTTGAAATCTAGACTTGAAGCGTTTCACAGACAAACTGAACCAGTTATTGATTATTATTCAAAAAAAGGTCTTGTTGCTAACCTTCATGCAGAGAAGCCTCCCAAAGAGGTGACAACTGAGGTCGAGAAGGTGTTGTCTTCATAG 2556 0.4394 MALYLLYESASGYGLFHAHGLDEIGQNTEAVRNSVSDLNRFGKVVQLAAFSPFQSALDALKQCNSVSEGLLTDELRSFLEINLPKVKEGKKAKFSLGVVDPKIGSQISEVTKIPCQSNEFVCELLRGVRLHFDRFLNDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARVAKYIEDKSKLTEEKIPGLTDIVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMDLSEYRRKLYDYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRMARYLANKCSIASRIDCFSERDSTAFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAMESAQNKDDEIATEAPTEASGKKGKRKAKSADANGVEEMAVDNMPNGVTNGDALEDHRSEKKKKEKRKLDVDTNMQDVTVQDDANNGEANGEVKKKKKKEKKDNDGEVQDGAIKTKKKKKKSKTEDDQFHPEIFAEIASEYFSLFFLSFGRIRDSAAWLSFCCRTSKTARPRRRITRRGSEMASANLEDVPSVDLMTELLRRMKCASKPDKRLILIGPPGSGKGTQSPVIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLERKGAKLDKVLNFAIDDAILEERITGRWLHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHRQTEPVIDYYSKKGLVANLHAEKPPKEVTTEVEKVLSS 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1692 851 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Lele21g1692 851 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 638 849 IPR027417 -
Lele21g1692 851 Gene3D Nop domain 299 422 IPR042239 -
Lele21g1692 851 Pfam Adenylate kinase, active site lid 764 799 IPR007862 GO:0004017
Lele21g1692 851 FunFam Nucleolar protein 56 140 298 - -
Lele21g1692 851 Gene3D - 610 850 IPR027417 -
Lele21g1692 851 FunFam Nucleolar protein 56 299 411 - -
Lele21g1692 851 FunFam Adenylate kinase mitochondrial 638 851 - -
Lele21g1692 851 TIGRFAM adk: adenylate kinase 639 849 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lele21g1692 851 MobiDBLite consensus disorder prediction 480 500 - -
Lele21g1692 851 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 3 548 IPR045056 GO:0030515|GO:0031428|GO:0032040
Lele21g1692 851 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
Lele21g1692 851 Pfam Adenylate kinase 642 827 - -
Lele21g1692 851 MobiDBLite consensus disorder prediction 430 460 - -
Lele21g1692 851 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Lele21g1692 851 Gene3D - 141 298 - -
Lele21g1692 851 PRINTS Adenylate kinase signature 669 683 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele21g1692 851 PRINTS Adenylate kinase signature 718 734 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele21g1692 851 PRINTS Adenylate kinase signature 641 654 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele21g1692 851 PRINTS Adenylate kinase signature 814 828 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele21g1692 851 PRINTS Adenylate kinase signature 797 812 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele21g1692 851 MobiDBLite consensus disorder prediction 515 553 - -
Lele21g1692 851 CDD ADK 639 841 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele21g1692 851 ProSitePatterns Adenylate kinase signature. 718 729 IPR033690 -
Lele21g1692 851 SUPERFAMILY Nop domain 163 412 IPR036070 -
Lele21g1692 851 Hamap Adenylate kinase [adk]. 638 850 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele21g1692 851 SMART NOSIC_2 170 222 IPR012976 -
Lele21g1692 851 MobiDBLite consensus disorder prediction 430 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1692 Lele-ChrLele21 24858599 24866336 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1692 21 24858599 24866336 Lele21g1692 21 24858599 24866336 ECH
Lele21g1692 21 24858599 24866336 Lele24g1637 24 21928675 21931467 hybridization