Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele24g1621 | ATGCGAGTGGAGGATCTGTGGGACGTTCAGGAGCCACAGCTAAGTCCCACCGAGAAGCTCAACGCGTGCTTCGAAAGCATCCCTGTGTCTGCTTTCCCTTCAGCTCCTTCAAGTCAAGTGGTGGAGATAAAATCAGACGCCACCCTACCGGAAGCTGTTGAAACACTAGCAAACCACAACATTCTGAGCGCACCGGTGGTGGATGTTAAAGCACCTGAAGGCGCTACTTGGATTGACAGATACATCGGAATAGTTGAGTTTGCCGGAATTGTTGTATGGGTCTTGCAGCAGTCTGAGCCTCCATCTCCCAAGAGTTCAAGCAGTGGAGGTGCTAATGGGTTCAGTTATCCTCTAGAACTTGGGGACTTAGGATTTGGATCTGCTGCAACAACTTCTGGCAACTATTTTGAGGATTTAACTTCTTCTGAATTTTATAAGAACACCAAGGTTTGTGATATTTCAGGATCATTCCGCTGGGCCCCATTTCTTGCATTGCAAAGATCAAACTCATTTCTGACCATGCTCTTGCTACTTTCCAAGTATAATATGAAGAGTATTCCTGTGGTAGATCTGGGTGCAGAGAAAATTGATACTATTATCACACAGCCTGGTGTTATTCATATGTTGGCAGAGTGCGTGGGGCTTCAGTGGTTCGAGAGTTGGGGAACCAAGAAACTATCTCAAGTTGGTCTTCCTGTAATGACACCTGATTGTATCATTAAGGTTTATGAGGATGAACCAGTGCTTCAGGCATTTAGATTGATGAGGAAAAAGAGGATTGGAGGGTTACCAGTAATAGAAAGAGGAAGCAACAAGGCTGTGGGTAACATAAGCCTACAAGATGTTCAATTCTTGCTAACTGCTCCAGAAATTTACCACGATTATAGAGCTATTACTGTAAAACACTTCCTGACGGCAGTTAGAAGCTACTTAGAGAAGCACAAAGAGGTCTTCCCAATGTCAAGCACCTTGGTTACATGCCAAAGGGATTGCACAATCAAAGAATTGATTCAATTGCTTGACCATGAGAAGAGTCATCGGATGTATGTTGTAACTGATGATGGTGATCTAGAAGGAGTGATCACACTCAGAGATATCATCTCAAGGCTAGTGGACGAGCCTAAAGGCTATTTTGGTGATTTCTTTGATGGTGTTCTTCCTTTGCCTCCAGACAGCCGGGTCTAA | 1185 | 0.443 | MRVEDLWDVQEPQLSPTEKLNACFESIPVSAFPSAPSSQVVEIKSDATLPEAVETLANHNILSAPVVDVKAPEGATWIDRYIGIVEFAGIVVWVLQQSEPPSPKSSSSGGANGFSYPLELGDLGFGSAATTSGNYFEDLTSSEFYKNTKVCDISGSFRWAPFLALQRSNSFLTMLLLLSKYNMKSIPVVDLGAEKIDTIITQPGVIHMLAECVGLQWFESWGTKKLSQVGLPVMTPDCIIKVYEDEPVLQAFRLMRKKRIGGLPVIERGSNKAVGNISLQDVQFLLTAPEIYHDYRAITVKHFLTAVRSYLEKHKEVFPMSSTLVTCQRDCTIKELIQLLDHEKSHRMYVVTDDGDLEGVITLRDIISRLVDEPKGYFGDFFDGVLPLPPDSRV | 394 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele24g1621 | 394 | ProSiteProfiles | CBS domain profile. | 320 | 376 | IPR000644 | - | |
| Lele24g1621 | 394 | Gene3D | - | 223 | 373 | IPR046342 | - | |
| Lele24g1621 | 394 | ProSiteProfiles | CBS domain profile. | 234 | 295 | IPR000644 | - | |
| Lele24g1621 | 394 | ProSiteProfiles | CBS domain profile. | 36 | 102 | IPR000644 | - | |
| Lele24g1621 | 394 | CDD | CBS_pair_SF | 175 | 282 | - | - | |
| Lele24g1621 | 394 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 22 | 370 | - | - | |
| Lele24g1621 | 394 | SUPERFAMILY | CBS-domain pair | 12 | 210 | IPR046342 | - | |
| Lele24g1621 | 394 | Pfam | CBS domain | 36 | 85 | IPR000644 | - | |
| Lele24g1621 | 394 | Pfam | CBS domain | 316 | 371 | IPR000644 | - | |
| Lele24g1621 | 394 | Pfam | CBS domain | 233 | 282 | IPR000644 | - | |
| Lele24g1621 | 394 | CDD | CBS_pair_SF | 239 | 367 | - | - | |
| Lele24g1621 | 394 | SMART | cbs_1 | 161 | 210 | IPR000644 | - | |
| Lele24g1621 | 394 | SMART | cbs_1 | 238 | 287 | IPR000644 | - | |
| Lele24g1621 | 394 | SMART | cbs_1 | 39 | 95 | IPR000644 | - | |
| Lele24g1621 | 394 | SMART | cbs_1 | 323 | 371 | IPR000644 | - | |
| Lele24g1621 | 394 | SUPERFAMILY | CBS-domain pair | 199 | 380 | IPR046342 | - | |
| Lele24g1621 | 394 | Gene3D | - | 30 | 215 | IPR046342 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele24g1621 | Lele-ChrLele24 | 21828978 | 21831392 | Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele24g1621 | 24 | 21828978 | 21831392 | Lele24g1621 | 24 | 21828978 | 21831392 | ECH | |
| Lele21g1679 | 21 | 24755098 | 24757551 | Lele24g1621 | 24 | 21828978 | 21831392 | hybridization | |
| Lele22g1657 | 22 | 22104135 | 22115280 | Lele24g1621 | 24 | 21828978 | 21831392 | hybridization |