Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1342 ATGGGACGAAAGCAATCACTGCGGTGCAAAGCAGCTCACTTAGTATCAGATCTTACCACTGTATTACTCAATCCAATCTCTGACAAGCCCTATAAACCCCCTCCCCTTCCTTCTTCTGAAGGAGTGGACATATCAAATGTATCTGCTTCGGAGTCAACTAATCGAGATGGTAGCCAGAATTTAACTGATGGGCCTGATACTTCATCCTTCACTGCATTCGTCTACTCATTATTGTCTTCTTCAGATTCTAGAGATAATGTAAACTCAGATGGGCAAAATGACACTAGAAGTCGAGCTGATATCCCTCCATCAGACTCAGCCGTGAAGGAAAATAGTGGAAAGAAAAGTTTGCTTTCTAGGGGTAAGCAATCACTCGGTAGAGCTATCAACCAAGCTGCAAGAATCACGGGATTCCGCTCTCAAGAGCGGAAGGATGAGACTGAAATGAAATTGGATGATGATCATGGTTCTAGATTATCTGGTGTTGAACTGAGGCATATCAAGGCTGAGGAGGAGCATACATCTTTGATTGATCTACCAGAAGCTTCTGAACCTTCAGCACTCCTTTCAGAGAAAATGAGAAATATTCTTTATGCTTCTCTTCCTGCTCTTATTCATGGGAGGAAATGGATGCTGCTATACAGTACACAGAGGCATGGGATATCACTTTTGACACTGTACAGGAGAAGCATGCTTTGGCCTGGCTTGAGTTTGCTGGTTGTTGGAGATCGTAAAGGTGCAGTTTTTGGTGGCTTGGTCGAAGCACCACTAAAGCCATCAAACAAAAAATATCAGGGAACAAGTAATACTTTTGTCTTCACAAACAACTCTGGTCATCCTACTTTATATCGCCCAACAGGGGTAAACCGCTATTTCACACTATGCTCCACTGACTTTCTAGCCCTTGGTGGGGGAGGTCATTTTGCTCTTTATTTGGCTGGTGATCTATTGAACGGGTCTAGTTCAGTCTCAGAAACATATGGAAATCCTTGCCTTGCGCATTCTCAGGACTTTGAAGTTAAGGAAGTAGAGCTGTGGGGCTTTGTATATGGTTCAAAGTATGAAGTAGTTTTAGCATTGAGCAGAACAGAGGCACCTGGAATCTGTCGATGGTAG 1116 0.4337 MGRKQSLRCKAAHLVSDLTTVLLNPISDKPYKPPPLPSSEGVDISNVSASESTNRDGSQNLTDGPDTSSFTAFVYSLLSSSDSRDNVNSDGQNDTRSRADIPPSDSAVKENSGKKSLLSRGKQSLGRAINQAARITGFRSQERKDETEMKLDDDHGSRLSGVELRHIKAEEEHTSLIDLPEASEPSALLSEKMRNILYASLPALIHGRKWMLLYSTQRHGISLLTLYRRSMLWPGLSLLVVGDRKGAVFGGLVEAPLKPSNKKYQGTSNTFVFTNNSGHPTLYRPTGVNRYFTLCSTDFLALGGGGHFALYLAGDLLNGSSSVSETYGNPCLAHSQDFEVKEVELWGFVYGSKYEVVLALSRTEAPGICRW 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1342 371 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 16 350 - -
Lele24g1342 371 MobiDBLite consensus disorder prediction 138 156 - -
Lele24g1342 371 MobiDBLite consensus disorder prediction 81 156 - -
Lele24g1342 371 MobiDBLite consensus disorder prediction 41 67 - -
Lele24g1342 371 MobiDBLite consensus disorder prediction 24 67 - -
Lele24g1342 371 MobiDBLite consensus disorder prediction 109 137 - -
Lele24g1342 371 ProSiteProfiles TLDc domain profile. 187 349 IPR006571 -
Lele24g1342 371 MobiDBLite consensus disorder prediction 81 100 - -
Lele24g1342 371 Pfam TLD 212 348 IPR006571 -
Lele24g1342 371 SMART 109ultra 186 349 IPR006571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1342 Lele-ChrLele24 19473101 19477218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1342 209 352 EF-hand Containing Proteins AT5G06260 31.169 1.50e-14 72.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1395 21 22429395 22433684 Lele24g1342 24 19473101 19477218 hybridization
Lele22g1388 22 19665614 19669731 Lele24g1342 24 19473101 19477218 hybridization