Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1388 ATGGGACGAAAGCAATCACTGCGGAGCAAAGCAGCTCACTTAGTATCGGATCTTACCACTGTATTACTCAATCCAATCTCTGACAAGCCCTCTAAACCCTCTCCCCCTCCTTCTTCTGAAGGAGTGGACATATCAAATGTGTCTGCTTCGGAGTCAACTAATCGAGGTGGTAGCCAGAATTTAACTGATGGGCCTGATACTTCATCCTTCACTGCATTCGTCTACTCATTATTGTCTTCTTCAGATTCTAGAGATAGTGTAAACTCAGATGGGCAAAATGATACTAGAAGTCGAGCTGATATCCCTCCATCAGACTCAGCCGTGAAGGAAAATAGTGGAAAGAAAAGTTTGTTTTCTAGGGGTAAGCAATCACTTGGTAGAGCTATCAACCAAGCTGCAAGAATCACGGGATTCCGCTCTCAAGAGCGGAAGGATGAGACTGAAATGAAATTGGATGATGATAATGGTTCTAGATTATCTGGGGTTGAACTGAGGCATATCAAGCCTGAGGAGGAGCATACATCTTTGATTGATCTACCAGAAGCTTCTGAACCTTCAGCGCTCCTTTCAGAGAAAATGAGAAATAGTCTTTATGCTTCTCTTCCTGCTCTTATTTATGGGAGGAAATGGATGCTGCTATACAGTACACAGACGCATGGTATTTCACTTTTGACACTGTACAGGAGAAGCATGCTTTGGCCTGGCTTGAGTTTGCTGGTTGTTGGAGATCGTAAAGGTGCAGTTTTTGGTGGCTTGGTCGAAGCACCACTAAAGCCATCAAACAAAAAATATCAGGGAACAAGTAATACTTTTGTCTTCACAAACACCTCTGGTCATCCTACTGTATATCGCCCAACAGGGGTAAACCGCTATTTCACACTATGCTCCACTGACTTTCTAGCCATTGGTGGGGGAGGTCATTTTGCTCTTTATTTGGATGGTGATCTATTGAACGGGTCTAGTTCAGTCTCAGAAACATATGGAAATCCTTGCCTTGCGCATTCTCAAGACTTTGAAGTTAAGGAAGTAGAGCTGTGGGGCTTTGTATATGGTTCAAAGTATGAAGAAGTTTTAGCCTTGAGCAGAACAGAGGCACCTGGAATCTGTCGATGGTAG 1116 0.4355 MGRKQSLRSKAAHLVSDLTTVLLNPISDKPSKPSPPPSSEGVDISNVSASESTNRGGSQNLTDGPDTSSFTAFVYSLLSSSDSRDSVNSDGQNDTRSRADIPPSDSAVKENSGKKSLFSRGKQSLGRAINQAARITGFRSQERKDETEMKLDDDNGSRLSGVELRHIKPEEEHTSLIDLPEASEPSALLSEKMRNSLYASLPALIYGRKWMLLYSTQTHGISLLTLYRRSMLWPGLSLLVVGDRKGAVFGGLVEAPLKPSNKKYQGTSNTFVFTNTSGHPTVYRPTGVNRYFTLCSTDFLAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLAHSQDFEVKEVELWGFVYGSKYEEVLALSRTEAPGICRW 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1388 371 ProSiteProfiles TLDc domain profile. 187 349 IPR006571 -
Lele22g1388 371 MobiDBLite consensus disorder prediction 23 67 - -
Lele22g1388 371 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 16 350 - -
Lele22g1388 371 MobiDBLite consensus disorder prediction 81 125 - -
Lele22g1388 371 SMART 109ultra 186 349 IPR006571 -
Lele22g1388 371 MobiDBLite consensus disorder prediction 137 157 - -
Lele22g1388 371 MobiDBLite consensus disorder prediction 109 125 - -
Lele22g1388 371 Pfam TLD 212 348 IPR006571 -
Lele22g1388 371 MobiDBLite consensus disorder prediction 38 67 - -
Lele22g1388 371 MobiDBLite consensus disorder prediction 138 157 - -
Lele22g1388 371 MobiDBLite consensus disorder prediction 81 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1388 Lele-ChrLele22 19665614 19669731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1388 209 356 EF-hand Containing Proteins AT5G06260 30.380 1.61e-14 72.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1388 22 19665614 19669731 Lele23g0619 23 4714176 4718534 hybridization
Lele22g1388 22 19665614 19669731 Lele24g1342 24 19473101 19477218 hybridization