Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1308 ATGCTTCTCTCTGCAATCACCCCCTCCTCCCTCCCCTCTTTCTGCTTCTGCAACCACCACGTTCTCTGCTCCAATTCCCTCACCACCAACCTCCTCTTCCTCTCCACCACCACCACCACTTCCTGTCCCCACGTTTTCGCTCGCCCTCGCCCTCTCTTCCTCTCCAACGCCTTCGCTTCTTCCTCTTCCCCTCCACCTCCCTCCGACACCTTCTTCCTCCAAACTCTTCACTCTAATAACCCTACTCCTAATTCTGATACGCTTCGCCATGTTTCTCAAACCACACGGCCTGATGATGATGACGACCATGATTCCGAACAGACTCTGGTGGCTTCCGCCTCCGCTCTCGCCTCCGCTATTCGTAAATCTTCCACTTCCCCTGTTGAGTTCATCCAGCGGATTGAGAAGGACCCCAAAAGCGGACTTGTACTCCCTAGTCCTGATTTTCAGAGACTTTGTGTCGAACAGCTTGACCTCTTTCGTCGGATGTTTCCTGAAGCTCTGCTCTCGGTTTATGTAAGACCAGCTGGTAGCTATGTGATGGATCGTCTGGAGTTGCGGAGGGTTTCTCTCAACCCTCGAGATGCAGATGACATTGTTATTTTAGTTGGCCGTTTTAACATTCCAACAGGTCTACGTGTTGCCGAAGCGGCTCTTTCGGAGTTGCGAGCTGAAGTTATCCCAGAAAGTAAGGCAGCGATTTTCCCAATGGTCAAACCCCCATTTATTGTTGGTTTCTTGGTTGCCGAGCTTCCGCTGATGGATGTTGGAACATTTGAGCAAGCGCATAGAGATGAGCGAGATAGTCGCCTTTCTGTTGAGAAAACTCATTCGTTGCCTCCCGTTTTGGATAGAAAGCGTAGGAAAATTCAAACTGTTCAGGTTAAGGATAACCCAACCATAACGGGAAGTTTCACAGACGAGCAAATATCAAATGCTGTCAACATTTCACGTTCTCTAGCTGTGGCATATGTTATGGATCAGAAAGCAATGTTACTTCAGCAGTCAACTTGGCAAAATAATGTCCGGATGAGTAATCTAGTTGAGCAAATCCGGGGTCCTCTTTCCAGTATTCAAACTTTAAGCAAAATCCTGTCCACTCAAACAAAGAGAAGTGAGGTTGCACATGACATTGTTGAAGACATCCTGTTGCAAGGTGATCGTCTGAAAGATGTCCTTGGACAACTCCAGGATGCTGTTCATTTGACCAAGGCCAACATACTGCGCTACAATGAAGAAGCAATCAAGAAAATGAATGGTTCAACTAATATGCTTGCTGAGTCACTAAAATCTCAGTTGTTGGATAAGTTTCCAAGGGATGATTCTGGAAACAAAATGCATAAATCTAGTGAGTCACATTCTCTAAGTGCTGCCGCCAAGGATATAGAGATGCCCCTACCACCTTATGCTCTCGCTCCCTTGCAACATGGAATTAGACTGTGCAATGTTTCTGAAGTACTAGCTGACTTGGTTGATGCTGCAAAACCTCTTGCCCAGAATCAAAAACGCATAATAGAACTGAATGAACTCTCATCACCTTTGCTAGCCGCTGTAGAAGGACCTGCTTTGCGTCAGGCTTTTAGCAATCTCATTGAAGGCGCTTTACTACGTACACATGTTGGTGGTAAGGTTGAAATTATGTGTACTGATGCCCCAGCAGGTGGTACCCTTGTAATCATTGATGATGATGGTCCTGACATGCAATATATGACCCAGATGCATTCGCTAACACCATATGGACCCGAACTCTTGTCTGAAGATATGGTTGAAGACAACATGACATGGAATTTTGTTGCGGGTTTGAGCGTCGCCCGCGAGATACTGGAGAGTTATGGGTGCGTTGTGCGTGTTGTGTCCCCTCGAATCAGGGATGCGCCTCTAGGGGCCGGGGGAACTCGCGTGGAACTCTGGCTTCCATCATCTATTGCAAACTCTGATTTGAGCAGCCACGAGAGATGCTCTCTGGGTCCTGTATATAGTACGCTTGATAGCTCATGGTATATGGTTCATTGCACAATGTTATCCTTAATGCAATGTATAAATGATAGATAG 2052 0.4678 MLLSAITPSSLPSFCFCNHHVLCSNSLTTNLLFLSTTTTTSCPHVFARPRPLFLSNAFASSSSPPPPSDTFFLQTLHSNNPTPNSDTLRHVSQTTRPDDDDDHDSEQTLVASASALASAIRKSSTSPVEFIQRIEKDPKSGLVLPSPDFQRLCVEQLDLFRRMFPEALLSVYVRPAGSYVMDRLELRRVSLNPRDADDIVILVGRFNIPTGLRVAEAALSELRAEVIPESKAAIFPMVKPPFIVGFLVAELPLMDVGTFEQAHRDERDSRLSVEKTHSLPPVLDRKRRKIQTVQVKDNPTITGSFTDEQISNAVNISRSLAVAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKRSEVAHDIVEDILLQGDRLKDVLGQLQDAVHLTKANILRYNEEAIKKMNGSTNMLAESLKSQLLDKFPRDDSGNKMHKSSESHSLSAAAKDIEMPLPPYALAPLQHGIRLCNVSEVLADLVDAAKPLAQNQKRIIELNELSSPLLAAVEGPALRQAFSNLIEGALLRTHVGGKVEIMCTDAPAGGTLVIIDDDGPDMQYMTQMHSLTPYGPELLSEDMVEDNMTWNFVAGLSVAREILESYGCVVRVVSPRIRDAPLGAGGTRVELWLPSSIANSDLSSHERCSLGPVYSTLDSSWYMVHCTMLSLMQCINDR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1308 683 CDD HisKA 344 398 IPR003661 GO:0000155|GO:0007165
Lele24g1308 683 Gene3D - 478 647 IPR036890 -
Lele24g1308 683 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 478 639 IPR036890 -
Lele24g1308 683 MobiDBLite consensus disorder prediction 65 91 - -
Lele24g1308 683 PANTHER CHLOROPLAST SENSOR KINASE, CHLOROPLASTIC 35 650 - -
Lele24g1308 683 MobiDBLite consensus disorder prediction 65 105 - -
Lele24g1308 683 CDD HATPase 523 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1308 Lele-ChrLele24 19089019 19100285 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1308 24 19089019 19100285 Lele24g1308 24 19089019 19100285 ECH
Lele21g1356 21 22010595 22012074 Lele24g1308 24 19089019 19100285 hybridization
Lele22g1349 22 19290141 19299932 Lele24g1308 24 19089019 19100285 hybridization