Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1349 ATGCTTTTCTCTGCAATCACCCCCACCTGCCTCCCCTCTCTCTGCTTCTGCAACCACCACCTTCTCTGCTCCAATTCCCTCACCACCAACCTCCTCCTCCTCTCCACCACCACCACTTCCTGTCCCCACGTTTTCACTCGCCCTCGACCTCTCTTCCTCTCCAACGCCTCCGCTTCTTCCTCTTCCCCTCCTCCTCCCTCCGACACCTTCCTCCAAACTCTTCACTCTAATAACCCTATTCCTAATTCTGATACGCTTCGCCATGTTTCTCAAACCACACGGCCTGATGATGATGATGATGATGACTATGATTCCGAACATACTCTGGTGGCTTCCGCCTCCGCTCTCGCCTCCGCTATTCGTAAATCTTCTACTTCCCCTGTTGAGTTCATCCAGCGGATTGAGAAGGACCCAAAAAGCGGACTTGTACTCCCTAGTCCTGATTTTCAGAGACTTTGTGTCGAACAGCTTGACCTCTTTGGTCGGATGTTTCCTGAAGCTCTGCTCTCGGTTTATTTAAGACCAGCTGGTAGCTATGTGATGGATCGTCTGGAGTTGCGGAGGGTTTCTCTCAACCCTCGAGATGCAGATGACATTGTTATTTTAGTTGGCCATTTTAACATTCCAACAGGTCTACGTGTTGCCGAAGCTGCTCTTTCGGAGTTGCGAGCTGAAGTTATCCCAGAAAGTAAGACTGTGATTTTCCCAATGGTCAAACCCCCATTTGTTGTTGGTTTCTTGGTTGCCGAGCTTCCGCTGATGGATGTTGGAACATTTGAGCAAGCGCATACAGATGAGCGAGATAGTCGCCTTTCTGTTGAGAAAACTCATTCGTTGCCTCCCGTTTTGGATAGAAAGCGTAGGAAAATTCAAACTGTTCAGGTCAAGGATAACCCAATCATAACAGGAAGTTTCACCGACGAGCAAATATCAAATGCTGTCAACATTTCACGTTCTCTAGCTGTGGCATATGTTATGGATCAGAAAGCAATGTTACTTCAGCAGTCAACTTGGCAAAATAATGTCCGGATGAGTAATCTAGTTGAGCAAATCCGGGGTCCTCTTTCCAGTATTCAAACTTTAAGCAAAATCCTGTCCACTCAAACAAAGAGAAGTGAGGTTGCACATGACATTGTTGAAGACATCCTGTTGCAAGGTGACCGTCTGAAAGATGTCCTTGGACAACTCCAGGATGCTGTTCATTTGACCAAGGCCAACATACTGCGCTACAATGAAGAAGCAATCAAGAAAATGAATGGTTCAAATAATATTCTTGCTGAGTCACTAAAATCTCAGTTATTGGATAACTTTCCAAGGGATGATTCTGGAAACAAAATGCATAAATCTACTGAGCCACAGTCTCTAAGTGCTGCTGCCAAGGATATAGAGATGCCCCTACCACCTTATGCTCTCGCTCCCTTGCGACATGGAATTAGACCGTGCAATGTTTCTGAAGTACTAGCCGACTTGGTTGATGCTGCAAAACCTCTTGCCCAGAATCAAAAACGCATAATAGAACTGAATGAACTCTCATCACCTTTGCTAGCCGCTGTAGAAGGACCTGCTTTGCGTCAGGCTTTTAGCAATCTCATTGAAGGCGCTTTACTACGTACACGTGTTGGTGGTAAGGTGGAAATTATGTGTACTGATGCACCAGCAGGTGGTACCCTTGTAATCATTGATGATGATGGTCCTGACATGCAATATATGACCCAGATGCATTCATTAACACCATATGGACCCGAACTCTTGTCTGAAGATATGGTTGAAGACAACATGACATGGAATTTTGTTGCGGGTTTGAGCGTCGCCCGCGAGATACTGGAGAGTTATGGGTGCGTTGTGCGTGTTGTGTCCCCTCGAGTCAGGGATGCGCCTCTAGGGGCCGGGGGAACTCGCGTGGAACTCTGGCTTCCATCATCTATTGCAAACTCTGATTTGAGCAGCCACGGGTAA 1956 0.4683 MLFSAITPTCLPSLCFCNHHLLCSNSLTTNLLLLSTTTTSCPHVFTRPRPLFLSNASASSSSPPPPSDTFLQTLHSNNPIPNSDTLRHVSQTTRPDDDDDDDYDSEHTLVASASALASAIRKSSTSPVEFIQRIEKDPKSGLVLPSPDFQRLCVEQLDLFGRMFPEALLSVYLRPAGSYVMDRLELRRVSLNPRDADDIVILVGHFNIPTGLRVAEAALSELRAEVIPESKTVIFPMVKPPFVVGFLVAELPLMDVGTFEQAHTDERDSRLSVEKTHSLPPVLDRKRRKIQTVQVKDNPIITGSFTDEQISNAVNISRSLAVAYVMDQKAMLLQQSTWQNNVRMSNLVEQIRGPLSSIQTLSKILSTQTKRSEVAHDIVEDILLQGDRLKDVLGQLQDAVHLTKANILRYNEEAIKKMNGSNNILAESLKSQLLDNFPRDDSGNKMHKSTEPQSLSAAAKDIEMPLPPYALAPLRHGIRPCNVSEVLADLVDAAKPLAQNQKRIIELNELSSPLLAAVEGPALRQAFSNLIEGALLRTRVGGKVEIMCTDAPAGGTLVIIDDDGPDMQYMTQMHSLTPYGPELLSEDMVEDNMTWNFVAGLSVAREILESYGCVVRVVSPRVRDAPLGAGGTRVELWLPSSIANSDLSSHG 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1349 651 CDD HisKA 344 398 IPR003661 GO:0000155|GO:0007165
Lele22g1349 651 PANTHER CHLOROPLAST SENSOR KINASE, CHLOROPLASTIC 35 649 - -
Lele22g1349 651 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 478 639 IPR036890 -
Lele22g1349 651 MobiDBLite consensus disorder prediction 56 105 - -
Lele22g1349 651 MobiDBLite consensus disorder prediction 56 89 - -
Lele22g1349 651 Gene3D - 477 646 IPR036890 -
Lele22g1349 651 CDD HATPase 523 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1349 Lele-ChrLele22 19290141 19299932 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1349 22 19290141 19299932 Lele22g1349 22 19290141 19299932 ECH
Lele22g1349 22 19290141 19299932 Lele23g0667 23 5141813 5145337 hybridization
Lele22g1349 22 19290141 19299932 Lele24g1308 24 19089019 19100285 hybridization